You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
I've done zero research on this, but essentially we would need to populate the parameters with the igenomes details prior to running. I assume this needs to be done before running any parameter validation etc. I'm not certain how parameters are propagated in Nextflow and if they must occur outside a workflow scope etc.
Currently this is done in WorkflowMain as a groovy script but if parameters are preserved this could be moved over to a Nextflow function.
maxulysse
changed the title
Add igenomes support in initialise
Add igenomes dedicated utils
Nov 10, 2023
Originally posted by @adamrtalbot in nf-core/tools#2430 (comment)
The text was updated successfully, but these errors were encountered: