Moving setup of sentieon-secrets to test.config

nf-core · Aug 9, 2023 · 78eaee6 · 78eaee6
1 parent 90e1861
commit 78eaee6
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Showing 2 changed files with 7 additions and 4 deletions.
diff --git a/conf/modules/align_sentieon.config b/conf/modules/align_sentieon.config
@@ -16,10 +16,6 @@
 //
 
 process {
-    withLabel: 'sentieon' {
-        ext.sentieon_auth_mech_base64 = secrets.SENTIEON_AUTH_MECH_BASE64
-        ext.sentieon_auth_data_base64 = secrets.SENTIEON_AUTH_DATA_BASE64
-    }
 
     withName: '.*ALIGN_SENTIEON:.*' {
         ext.when = params.aligner.equals("sentieon")

diff --git a/conf/test.config b/conf/test.config
@@ -50,3 +50,10 @@ params {
     vep_filters          = "https://raw.githubusercontent.com/nf-core/test-datasets/raredisease/reference/hgnc.txt"
     vep_cache_version    = 107
 }
+
+process {
+    withLabel: 'sentieon' {
+        ext.sentieon_auth_mech_base64 = secrets.SENTIEON_AUTH_MECH_BASE64
+        ext.sentieon_auth_data_base64 = secrets.SENTIEON_AUTH_DATA_BASE64
+    }
+}