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gffread command line error #117

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noirot opened this issue Nov 6, 2018 · 1 comment
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gffread command line error #117

noirot opened this issue Nov 6, 2018 · 1 comment

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@noirot
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noirot commented Nov 6, 2018

The gffread command line in process convertGFFtoGTF is not correct
gffread $gff -T -o > ${gff.baseName}.gtf
should be
gffread $gff -T -o ${gff.baseName}.gtf
@apeltzer apeltzer mentioned this issue Dec 12, 2018
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@apeltzer
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Fixed in #136, will be in the next stable release

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@apeltzer @noirot