Update the utils_nfcore_pipeline subworkflow
#234
fasteriusci.yml
on: push
Choose nextflow versions to test against depending on target branch
Matrix: Run pipeline with test data
Annotations
4 errors and 6 warnings
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Run pipeline with test data (latest-everything, tests/pipeline/test_spaceranger_ffpe_v1.nf.test)
Process completed with exit code 1.
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Run pipeline with test data (latest-everything, tests/pipeline/test_spaceranger_ffpe_v1.nf.test)
Process completed with exit code 1.
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Run pipeline with test data (23.04.0, tests/pipeline/test_spaceranger_ffpe_v1.nf.test)
Process completed with exit code 1.
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Run pipeline with test data (23.04.0, tests/pipeline/test_spaceranger_ffpe_v1.nf.test)
Process completed with exit code 1.
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Run pipeline with test data (23.04.0, tests/pipeline/test_downstream.nf.test)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Run pipeline with test data (latest-everything, tests/pipeline/test_downstream.nf.test)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Run pipeline with test data (latest-everything, tests/pipeline/test_spaceranger_ffpe_v1.nf.test)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Run pipeline with test data (23.04.0, tests/pipeline/test_spaceranger_ffpe_v1.nf.test)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Run pipeline with test data (23.04.0, tests/pipeline/test_spaceranger_ffpe_v2_cytassist.nf.test)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Run pipeline with test data (latest-everything, tests/pipeline/test_spaceranger_ffpe_v2_cytassist...
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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