Merge pull request #2243 from mirpedrol/remote-url-when-linting-all

Take into accout a provided remote url when linting all modules
nf-core · Apr 21, 2023 · b124e08 · b124e08
2 parents 8c9cc54 + 2cdb158
commit b124e08
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -24,6 +24,7 @@
 
 - Add an `--empty-template` option to create a module without TODO statements or examples ([#2175](https://github.com/nf-core/tools/pull/2175) & [#2177](https://github.com/nf-core/tools/pull/2177))
 - Removed the `nf-core modules mulled` command and all its code dependencies ([2199](https://github.com/nf-core/tools/pull/2199)).
+- Take into accout the provided `--git_remote` URL when linting all modules ([2243](https://github.com/nf-core/tools/pull/2243)).
 
 ### Subworkflows
 

diff --git a/nf_core/modules/lint/__init__.py b/nf_core/modules/lint/__init__.py
@@ -91,6 +91,8 @@ def __init__(
             modules_json.check_up_to_date()
             self.all_remote_modules = []
             for repo_url, components in modules_json.get_all_components(self.component_type).items():
+                if remote_url is not None and remote_url != repo_url:
+                    continue
                 for org, comp in components:
                     self.all_remote_modules.append(
                         NFCoreModule(