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  • University of California, Berkeley
  • Berkeley

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@MesserLab @therkildsen-lab @therkildsen-class

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  1. sudmantlab/loco-pipe sudmantlab/loco-pipe Public

    loco-pipe is an automated Snakemake pipeline that streamlines a set of essential population genomic analyses for low-coverage whole genome sequencing (lcWGS) data

    Python 10 2

  2. sudmantlab/amylase_diversity_project sudmantlab/amylase_diversity_project Public

    Python 9

  3. therkildsen-lab/genomic-data-analysis therkildsen-lab/genomic-data-analysis Public

    Pipelines for analyzing genomic or transcriptomic data

    Shell 13 8

  4. therkildsen-lab/data-processing therkildsen-lab/data-processing Public

    Scripts for going from raw .fastq files to processed and quality-checked .bam files for downstream analysis

    Shell 11 3

  5. nt246/NTRES6940-data-science nt246/NTRES6940-data-science Public

    Collaborative and Reproducible Data Science in R

    HTML 30 46