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Modules
Niema Moshiri edited this page Apr 16, 2018
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As mentioned in the FAVITES description, the simulation process is broken down into a series of interactions between abstract modules, and the user has the freedom to choose which implementation of each module to use (or to implement a module from scratch if need be; see Development Guide) to fully customize the simulation process.
- ContactNetwork
- ContactNetworkEdge
- ContactNetworkGenerator
- ContactNetworkNode
- Driver
- EndCriteria
- Logging
- NodeAvailability
- NodeEvolution
- NumBranchSample
- NumTimeSample
- SeedSelection
- SeedSequence
- SequenceEvolution
- Sequencing
- SourceSample
- TimeSample
- TransmissionNodeSample
- TransmissionTimeSample
- TreeNode
- TreeUnit
Niema Moshiri & Siavash Mirarab 2016