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Allow pandas.Series as valid input for second_level_input in SecondLevelModel class #2411

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JohannesWiesner opened this issue Feb 22, 2020 · 1 comment · Fixed by #4070
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Allow pandas.Series as valid input for second_level_input in SecondLevelModel class #2411

JohannesWiesner opened this issue Feb 22, 2020 · 1 comment · Fixed by #4070
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Enhancement for feature requests GLM Issues/PRs related to the nilearn.glm module.
Milestone
release 0.10.3

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@JohannesWiesner
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It would be nice, if a pandas.Series would also be allowed as valid input for second_level_input in SecondLevelModel. Currently, I have to convert my series containing the NIFTI filepaths to a list. However, I guess most of the time you work with a pandas.DataFrame containing information about your subjects (ID, age, filepaths, etc.) and you would like to provide second_level_input directly with the column containing the filepaths (e.g. SecondLevelModel.fit(second_level_input=my_dataframe['filepaths')
@bthirion
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Agreed !
For that one, I think we're going to implement in nilearn.stats (note that nistats will be frozen soonish, see e.g. #2299).
Best,

@kchawla-pi kchawla-pi transferred this issue from nilearn/nistats Apr 2, 2020
@kchawla-pi kchawla-pi transferred this issue from nilearn/nilearn Apr 2, 2020
@kchawla-pi kchawla-pi transferred this issue from nilearn/nistats Apr 2, 2020
@kchawla-pi kchawla-pi added the GLM Issues/PRs related to the nilearn.glm module. label Apr 2, 2020
@Remi-Gau Remi-Gau added this to the release 0.11.0 milestone Oct 7, 2023
@Remi-Gau Remi-Gau added the Enhancement for feature requests label Oct 18, 2023
@Remi-Gau Remi-Gau mentioned this issue Oct 19, 2023
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Enhancement for feature requests GLM Issues/PRs related to the nilearn.glm module.
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release 0.10.3
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[ENH] Allow pandas.Series as valid input for second_level_input Remi-Gau/nilearn
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@bthirion @Remi-Gau @kchawla-pi @JohannesWiesner