[DOC] Finish adding badges to changelog

doc/changes/0.1.2.rst

@@ -11,4 +11,4 @@
 Changelog
 ---------
 
-The ``0.1.2`` release is a bugfix release, specifically to fix the :class:`~maskers.NiftiMapsMasker`.
+- :bdg-dark:`Code` The ``0.1.2`` release is a bugfix release, specifically to fix the :class:`~maskers.NiftiMapsMasker`.

doc/changes/0.1.3.rst

@@ -26,21 +26,21 @@ It also includes a full rewamp of the documentation, and support for Python 3.
 Fixes
 -----
 
-- Dealing with ``NaNs`` in function :func:`~plotting.plot_connectome`.
+- :bdg-dark:`Code` Dealing with ``NaNs`` in function :func:`~plotting.plot_connectome`.
 
 - :bdg-info:`Plotting` Fix extreme values in colorbar were sometimes brok.
 
-- Fix confounds removal with single confounds.
+- :bdg-dark:`Code` Fix confounds removal with single confounds.
 
-- Fix frequency filtering.
+- :bdg-dark:`Code` Fix frequency filtering.
 
-- Keep header information in images.
+- :bdg-dark:`Code` Keep header information in images.
 
-- ``add_overlay`` finds ``vmin`` and ``vmax`` automatically.
+- :bdg-dark:`Code` ``add_overlay`` finds ``vmin`` and ``vmax`` automatically.
 
 - :bdg-success:`API` Function :func:`~plotting.plot_connectome` now supports ``vmin`` and ``vmax``.
 
-- Detrending 3D images no longer puts them to zero.
+- :bdg-dark:`Code` Detrending 3D images no longer puts them to zero.
 
 
 Contributors (from ``git shortlog -ns 0.1.2..0.1.3``):

doc/changes/0.1.4.rst

@@ -15,9 +15,9 @@ Highlights
 
 - :bdg-secondary:`Maint` Obey Debian packaging rules.
 
-- Add the Destrieux 2009 and Power 2011 atlas.
+- :bdg-dark:`Code` Add the Destrieux 2009 and Power 2011 atlas.
 
-- Better caching in maskers.
+- :bdg-dark:`Code` Better caching in maskers.
 
 
 Contributors (from ``git shortlog -ns 0.1.3..0.1.4``):

doc/changes/0.2.0.rst

@@ -20,19 +20,19 @@ New features
 
 - :bdg-success:`API` The new module :mod:`nilearn.connectome` now has class :class:`nilearn.connectome.ConnectivityMeasure` can be useful for computing functional connectivity matrices.
 
-- The function ``nilearn.connectome.sym_to_vec`` in same module :mod:`nilearn.connectome` is also implemented as a helper function to class :class:`nilearn.connectome.ConnectivityMeasure`.
+- :bdg-dark:`Code` The function ``nilearn.connectome.sym_to_vec`` in same module :mod:`nilearn.connectome` is also implemented as a helper function to class :class:`nilearn.connectome.ConnectivityMeasure`.
 
-- The class :class:`decomposition.DictLearning` in :mod:`nilearn.decomposition` is a decomposition method similar to :term:`ICA` that imposes sparsity on components instead of independence between them.
+- :bdg-dark:`Code` The class :class:`decomposition.DictLearning` in :mod:`nilearn.decomposition` is a decomposition method similar to :term:`ICA` that imposes sparsity on components instead of independence between them.
 
 - :bdg-secondary:`Maint` Integrating back references template from ``sphinx-gallery`` of ``0.0.11`` version release.
 
 - :bdg-success:`API` Globbing expressions can now be used in all nilearn functions expecting a list of files.
 
-- The new module :mod:`nilearn.regions` now has class :class:`regions.RegionExtractor` which can be used for post processing brain regions of interest extraction.
+- :bdg-success:`API` The new module :mod:`nilearn.regions` now has class :class:`regions.RegionExtractor` which can be used for post processing brain regions of interest extraction.
 
-- The function :func:`~regions.connected_regions` in :mod:`nilearn.regions` is also implemented as a helper function to :class:`regions.RegionExtractor`.
+- :bdg-success:`API` The function :func:`~regions.connected_regions` in :mod:`nilearn.regions` is also implemented as a helper function to :class:`regions.RegionExtractor`.
 
-- The function :func:`~image.threshold_img` in :mod:`nilearn.image` is implemented to use it for thresholding statistical maps.
+- :bdg-success:`API` The function :func:`~image.threshold_img` in :mod:`nilearn.image` is implemented to use it for thresholding statistical maps.
 
 Enhancements
 ------------
@@ -41,21 +41,21 @@ Enhancements
 
 - :bdg-secondary:`Maint` Documentation enhancement by integrating ``sphinx-gallery`` notebook style examples.
 
-- Documentation about class :class:`maskers.NiftiSpheresMasker`.
+- :bdg-primary:`Doc` Documentation about class :class:`maskers.NiftiSpheresMasker`.
 
 Bug fixes
 ---------
 
-- Fixed bug to control the behaviour when ``cut_coords=0`` in function :func:`~plotting.plot_stat_map` in :mod:`nilearn.plotting` (See :gh:`784`).
+- :bdg-dark:`Code` Fixed bug to control the behaviour when ``cut_coords=0`` in function :func:`~plotting.plot_stat_map` in :mod:`nilearn.plotting` (See :gh:`784`).
 
-- Fixed bug in function :func:`~image.copy_img` occurred while caching the Nifti images (See :gh:`793`).
+- :bdg-dark:`Code` Fixed bug in function :func:`~image.copy_img` occurred while caching the Nifti images (See :gh:`793`).
 
-- Fixed bug causing an ``IndexError`` in ``fast_abs_percentile`` (See :gh:`875`).
+- :bdg-dark:`Code` Fixed bug causing an ``IndexError`` in ``fast_abs_percentile`` (See :gh:`875`).
 
 API changes summary
 -------------------
 
-- The utilities in function :func:`~connectome.group_sparse_covariance` have been moved into module :mod:`nilearn.connectome`.
+- :bdg-secondary:`Maint` The utilities in function :func:`~connectome.group_sparse_covariance` have been moved into module :mod:`nilearn.connectome`.
 
 - :bdg-success:`API` The default value for number of cuts (``n_cuts``) in function :func:`~plotting.find_cut_slices` in :mod:`nilearn.plotting` module has been changed from 12 to 7 i.e. ``n_cuts=7``.
 

doc/changes/0.2.1.rst

@@ -7,4 +7,4 @@
 Changelog
 ---------
 
-Small bugfix for more flexible input types (targetter in particular at making code easier in nistats).
+- :bdg-dark:`Code` Small bugfix for more flexible input types (targetter in particular at making code easier in nistats).

doc/changes/0.2.2.rst

@@ -30,32 +30,32 @@ Enhancements
 Fixes
 -----
 
-- Fix ``symmetric_split`` behavior in function :func:`~datasets.fetch_atlas_harvard_oxford`.
+- :bdg-dark:`Code` Fix ``symmetric_split`` behavior in function :func:`~datasets.fetch_atlas_harvard_oxford`.
 
-- Fix casting errors when providing integer data to function :func:`~image.high_variance_confounds`.
+- :bdg-dark:`Code` Fix casting errors when providing integer data to function :func:`~image.high_variance_confounds`.
 
 - :bdg-secondary:`Maint` Fix matplotlib ``1.5.0`` compatibility in function :func:`~plotting.plot_prob_atlas`.
 
 - :bdg-secondary:`Maint` Fix matplotlib backend choice on Mac OS X.
 
 - :bdg-info:`Plotting` Function :func:`~plotting.find_xyz_cut_coords` raises a meaningful error when 4D data is provided instead of 3D.
 
-- Class :class:`~maskers.NiftiSpheresMasker` handles radius smaller than the size of a :term:`voxel`.
+- :bdg-dark:`Code` Class :class:`~maskers.NiftiSpheresMasker` handles radius smaller than the size of a :term:`voxel`.
 
-- Class :class:`~regions.RegionExtractor` handles data containing ``Nans``.
+- :bdg-dark:`Code` Class :class:`~regions.RegionExtractor` handles data containing ``Nans``.
 
-- Confound regression does not force systematically the normalization of the confounds.
+- :bdg-dark:`Code` Confound regression does not force systematically the normalization of the confounds.
 
-- Force time series normalization in :class:`~connectome.ConnectivityMeasure` and check dimensionality of the input.
+- :bdg-dark:`Code` Force time series normalization in :class:`~connectome.ConnectivityMeasure` and check dimensionality of the input.
 
-- Function ``nilearn._utils.numpy_conversions.csv_to_array`` could consider valid CSV files as invalid.
+- :bdg-dark:`Code` Function ``nilearn._utils.numpy_conversions.csv_to_array`` could consider valid CSV files as invalid.
 
 Changes
 -------
 
-- Deprecated dataset downloading function have been removed.
+- :bdg-danger:`Deprecation` Deprecated dataset downloading function have been removed.
 
-- Download progression message refreshing rate has been lowered to sparsify CircleCI logs.
+- :bdg-dark:`Code` Download progression message refreshing rate has been lowered to sparsify CircleCI logs.
 
 Contributors
 ------------

doc/changes/0.2.3.rst

@@ -16,15 +16,15 @@ The ``0.2.3`` is a small feature release for BrainHack 2016.
 New features
 ------------
 
-- Mathematical formulas based on ``numpy`` functions can be applied on an image or a list of images using function :func:`~image.math_img`.
+- :bdg-dark:`Code` Mathematical formulas based on ``numpy`` functions can be applied on an image or a list of images using function :func:`~image.math_img`.
 
-- Downloader for COBRE datasets of 146 rest :term:`fMRI` subjects with function ``nilearn.datasets.fetch_cobre``.
+- :bdg-dark:`Code` Downloader for COBRE datasets of 146 rest :term:`fMRI` subjects with function ``nilearn.datasets.fetch_cobre``.
 
-- Downloader for Dosenbach atlas :func:`~datasets.fetch_coords_dosenbach_2010`.
+- :bdg-dark:`Code` Downloader for Dosenbach atlas :func:`~datasets.fetch_coords_dosenbach_2010`.
 
-- Fetcher for multiscale functional brain parcellations (BASC) :func:`~datasets.fetch_atlas_basc_multiscale_2015`.
+- :bdg-dark:`Code` Fetcher for multiscale functional brain parcellations (BASC) :func:`~datasets.fetch_atlas_basc_multiscale_2015`.
 
 Bug fixes
 ---------
 
-- Better dimming on white background for plotting.
+- :bdg-info:`Plotting` Better dimming on white background for plotting.

doc/changes/0.2.4.rst

@@ -13,19 +13,19 @@ The ``0.2.4`` is a small release focused on documentation for teaching.
 New
 ---
 
-- The path given to the ``memory`` argument of object now have their "~" expanded to the homedir.
+- :bdg-success:`API` The path given to the ``memory`` argument of object now have their "~" expanded to the homedir.
 
 - :bdg-success:`API` Display object created by plotting now uniformly expose an ``add_markers`` method.
 
-- Function :func:`~plotting.plot_connectome` now plots connectome with colorbars.
+- :bdg-info:`Plotting` Function :func:`~plotting.plot_connectome` now plots connectome with colorbars.
 
 - :bdg-success:`API` New function :func:`~image.resample_to_img` to resample one image on another one (just resampling / interpolation, no coregistration).
 
 Changes
 -------
 
-- Atlas fetcher :func:`~datasets.fetch_atlas_msdl` now returns directly labels of the regions in output variable ``labels`` and its coordinates in output variable ``region_coords`` and its type of network in ``networks``.
+- :bdg-success:`API` Atlas fetcher :func:`~datasets.fetch_atlas_msdl` now returns directly labels of the regions in output variable ``labels`` and its coordinates in output variable ``region_coords`` and its type of network in ``networks``.
 
 - :bdg-success:`API` The output variable name ``regions`` is now changed to ``maps`` in AAL atlas fetcher :func:`~datasets.fetch_atlas_aal`.
 
-- AAL atlas now returns directly its labels in variable ``labels`` and its index values in variable ``indices``.
+- :bdg-success:`API` AAL atlas now returns directly its labels in variable ``labels`` and its index values in variable ``indices``.

doc/changes/0.2.5.rst

@@ -14,21 +14,21 @@ The new minimum required version of ``scikit-learn`` is ``0.14.1``.
 Changes
 -------
 
-- Default option for ``dim`` argument in plotting functions which uses :term:`MNI` template as a background image is now changed to 'auto' mode. Meaning that an automatic contrast setting on background image is applied by default.
+- :bdg-dark:`Code` Default option for ``dim`` argument in plotting functions which uses :term:`MNI` template as a background image is now changed to 'auto' mode. Meaning that an automatic contrast setting on background image is applied by default.
 
-- ``Scikit-learn`` validation tools have been imported and are now used to check consistency of input data, in SpaceNet for example.
+- :bdg-dark:`Code` ``Scikit-learn`` validation tools have been imported and are now used to check consistency of input data, in SpaceNet for example.
 
 New
 ---
 
 - :bdg-success:`API` Add an option to select only off-diagonal elements in function ``sym_to_vec``. Also, the scaling of matrices is modified: we divide the diagonal by ``sqrt(2)`` instead of multiplying the off-diagonal elements.
 
-- Connectivity examples rely on :class:`~connectome.ConnectivityMeasure`.
+- :bdg-primary:`Doc` Connectivity examples rely on :class:`~connectome.ConnectivityMeasure`.
 
 Fixes
 -----
 
-- ``Scipy 0.18`` introduces a bug in a corner-case of resampling. Nilearn ``0.2.5`` can give wrong results with ``scipy 0.18``, but this is fixed in ``0.2.6``.
+- :bdg-dark:`Code` ``Scipy 0.18`` introduces a bug in a corner-case of resampling. Nilearn ``0.2.5`` can give wrong results with ``scipy 0.18``, but this is fixed in ``0.2.6``.
 
 - :bdg-secondary:`Maint` Broken links and references fixed in docs.
 
@@ -45,7 +45,7 @@ improved documentation.
 New
 ---
 
-- N:bdg-success:`API` ew display_mode options in functions :func:`~plotting.plot_glass_brain` and :func:`~plotting.plot_connectome`. It is possible to plot right and left hemisphere projections separately.
+- :bdg-success:`API` New display_mode options in functions :func:`~plotting.plot_glass_brain` and :func:`~plotting.plot_connectome`. It is possible to plot right and left hemisphere projections separately.
 
 - :bdg-success:`API` New function :func:`~datasets.load_mni152_brain_mask` to load canonical brain mask image in :term:`MNI` template space.
 
@@ -57,7 +57,7 @@ New
 
 - :bdg-success:`API` New simple data downloader :func:`~datasets.fetch_localizer_button_task` to simplify some examples.
 
-- Function :func:`~datasets.fetch_localizer_contrasts` can now download a specific list of subjects rather than a range of subjects.
+- :bdg-dark:`Code` Function :func:`~datasets.fetch_localizer_contrasts` can now download a specific list of subjects rather than a range of subjects.
 
 - :bdg-success:`API` New function :func:`~datasets.get_data_dirs` to check where nilearn downloads data.
 

doc/changes/0.2.6.rst

@@ -17,13 +17,13 @@ Several bugs related to masks in Searchlight and ABIDE fetching have been resolv
 Fixes
 -----
 
-- Change default ``dtype`` in function :func:`~image.concat_imgs` to be the original type of the data (see :gh:`1238`).
+- :bdg-dark:`Code` Change default ``dtype`` in function :func:`~image.concat_imgs` to be the original type of the data (see :gh:`1238`).
 
-- Fix ``SearchLight`` that did not run without ``process_mask`` or with one :term:`voxel` mask.
+- :bdg-dark:`Code` Fix ``SearchLight`` that did not run without ``process_mask`` or with one :term:`voxel` mask.
 
-- Fix flipping of left hemisphere when plotting glass brain.
+- :bdg-info:`Plotting` Fix flipping of left hemisphere when plotting glass brain.
 
-- Fix bug when downloading ABIDE timeseries.
+- :bdg-dark:`Code` Fix bug when downloading ABIDE timeseries.
 
 Enhancements
 ------------