MAINT: Migration of reportlets and interfaces from MRIQC #44
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…ve been deprecated
…writing out the MELODIC reportlet
…n both firefox and chrome
…- (niworkflows-0.8.2)
…provenance key of BOLD records, thus BOLD ratings were not being collected. Fixes #784
cli does not have an option for `fd_radius`
This interface runs some heuristics and tries to ``datalad get`` those files that look like broken symlinks in a datalad dataset.
ENH: Add a new ``DataladIdentityInterface``
…rrection remove slice-timing correction
The calculation of the new shape within the preprocessing for synthstrip was done in XYZ coordinates (i.e., extents for each physical axis were estimated and divided by the new 1mm pixel size). However, the new axis sizes did not account for the fact that data was stored with IJK -> XZY convention (corresponding to LIA). This PR accounts for this miscalculation. Resolves: #999.
Debugging #1023.
Adds a sentinel env variable (a la fMRIPrep) and improves error handling within the interface. Resolves: #1023.
Making MRIQC to accept either none or just one participant label.
Indeed, when I was feeding the output of a python script within a bash loop, the ``--participant-label`` argument was picking several identifiers as a single input. This bugfix is a more robust solution. Revises: #1025.
lists all the summary metrics output.
DOC : complete the documentation of summary_stats()
ENH: Add migas telemetry
This was likely caused by a change in Python of how `Event()` is initialized. Clearing the event before entering the loop seems necessary now.
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"chain": [],
"cmd": "codespell -w",
"exit": 0,
"extra_inputs": [],
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"pwd": "."
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Requires bids-standard/pybids#936. With special love to @yasseraleman.
…int/add-mriqc-reportlets
This was referenced Feb 28, 2023
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MAINT: Migration of reportlets and interfaces from MRIQC
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Resolves: #5