Merge 40aa316 into a374998

nipy · Feb 19, 2018 · fb79542 · fb79542
2 parents a374998 + 40aa316
commit fb79542
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Showing 3 changed files with 9 additions and 3 deletions.
diff --git a/.circleci/test_py2_pytest.sh b/.circleci/test_py2_pytest.sh
@@ -1,3 +1,3 @@
 #!/bin/bash
 
-docker run --rm=false -t -v $WORKDIR:/work -v $HOME/examples:/data/examples:ro -w /work -e CI_SKIP_TEST=1 -e NIPYPE_RESOURCE_MONITOR=1 -e FSL_COURSE_DATA="/data/examples/nipype-fsl_course_data" "${DOCKER_IMAGE}:py27" /usr/bin/run_pytests.sh
+docker run --rm=false -t -v $WORKDIR:/work -v $HOME/examples:/data/examples:ro -w /work -e CI_SKIP_TEST=1 -e NIPYPE_RESOURCE_MONITOR=1 "${DOCKER_IMAGE}:py27" /usr/bin/run_pytests.sh
diff --git a/.circleci/test_py3_pytest.sh b/.circleci/test_py3_pytest.sh
@@ -1,3 +1,3 @@
 #!/bin/bash
 
-docker run --rm=false -t -v $WORKDIR:/work -v $HOME/examples:/data/examples:ro -w /work -e CI_SKIP_TEST=1 -e NIPYPE_RESOURCE_MONITOR=1 -e FSL_COURSE_DATA="/data/examples/nipype-fsl_course_data"  "${DOCKER_IMAGE}:py36" /usr/bin/run_pytests.sh
+docker run --rm=false -t -v $WORKDIR:/work -v $HOME/examples:/data/examples:ro -w /work -e CI_SKIP_TEST=1 -e NIPYPE_RESOURCE_MONITOR=1 "${DOCKER_IMAGE}:py36" /usr/bin/run_pytests.sh
diff --git a/nipype/workflows/dmri/fsl/tbss.py b/nipype/workflows/dmri/fsl/tbss.py
@@ -387,8 +387,14 @@ def create_tbss_all(name='tbss_all', estimate_skeleton=True):
     -------
 
     >>> from nipype.workflows.dmri.fsl import tbss
-    >>> tbss = tbss.create_tbss_all('tbss')
+    >>> tbss = tbss.create_tbss_all('tbss', estimate_skeleton=True)
     >>> tbss.inputs.inputnode.skeleton_thresh = 0.2
+    >>> tbss.inputs.inputnode.fa_list = ['s1_wrapped_FA.nii', 's2_wrapped_FA.nii', 's3_wrapped_FA.nii']
+
+    >>> tbss = tbss.create_tbss_all('tbss', estimate_skeleton=False)
+    >>> tbss.inputs.inputnode.skeleton_thresh = 0.2
+    >>> tbss.inputs.inputnode.fa_list = ['s1_wrapped_FA.nii', 's2_wrapped_FA.nii', 's3_wrapped_FA.nii']
+
 
     Inputs::