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ENH: Add the angle_offset option for manually rotating ligand vectors #202

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merged 6 commits into from
Nov 19, 2021

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@BvB93 BvB93 commented Nov 18, 2021

Examples

optional:
    ligand:
        anchor:
            # Rotate the ligand vector by 45 degree along a plane defined by O(0)-C(1)-O(2)
            group: OC(=O)C
            group_idx: [0, 1, 2]
            angle_offset: 45

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codecov bot commented Nov 18, 2021

Codecov Report

Merging #202 (02f2fdc) into master (6b91d35) will decrease coverage by 1.23%.
The diff coverage is 69.23%.

❗ Current head 02f2fdc differs from pull request most recent head 5944a7b. Consider uploading reports for the commit 5944a7b to get more accurate results
Impacted file tree graph

@@            Coverage Diff             @@
##           master     #202      +/-   ##
==========================================
- Coverage   66.58%   65.35%   -1.24%     
==========================================
  Files          48       48              
  Lines        3819     3856      +37     
  Branches      665      672       +7     
==========================================
- Hits         2543     2520      -23     
- Misses       1114     1164      +50     
- Partials      162      172      +10     
Impacted Files Coverage Δ
CAT/data_handling/anchor_parsing.py 71.13% <58.97%> (-9.52%) ⬇️
CAT/__version__.py 100.00% <100.00%> (ø)
CAT/attachment/ligand_anchoring.py 88.03% <100.00%> (+0.31%) ⬆️
CAT/attachment/ligand_opt.py 79.79% <100.00%> (-2.03%) ⬇️
CAT/utils.py 69.09% <100.00%> (+0.14%) ⬆️
CAT/recipes.py 52.94% <0.00%> (-47.06%) ⬇️
CAT/base.py 62.57% <0.00%> (-5.85%) ⬇️
CAT/attachment/edge_distance.py 71.69% <0.00%> (-5.67%) ⬇️
CAT/data_handling/validate_input.py 59.25% <0.00%> (-5.56%) ⬇️
CAT/attachment/remove_atoms_cm.py 80.00% <0.00%> (-5.00%) ⬇️
... and 7 more

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@BvB93 BvB93 added this to the CAT 0.10.1 milestone Nov 18, 2021
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