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16 jun21 dendrogram update #157

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merged 19 commits into from
Aug 13, 2021
Merged

16 jun21 dendrogram update #157

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a0b9074
16Jun21 dendrogram update
shawntanzk Jul 15, 2021
3b4bd36
Added nomeclature_table csv for other taxonomies
shawntanzk Jul 19, 2021
99952a9
Update nomenclature_table_CCN202103220.csv
shawntanzk Jul 19, 2021
d6a4333
20 July update for cell_set_nomenclature.xlsx
shawntanzk Jul 20, 2021
151b756
20 July update for nomenclature tables
shawntanzk Jul 20, 2021
ad21e5e
Update CCN202002013.json
shawntanzk Jul 27, 2021
8bc66b8
Added 26Jul21 Human json file
shawntanzk Jul 27, 2021
6a564c5
26Jul21 update of cell_set_nomenclature.xlsx
shawntanzk Jul 27, 2021
b46fb3b
Merge branch '16Jun21-Dendrogram-Update' of https://github.com/obophe…
shawntanzk Jul 27, 2021
18f8727
26Jul21 update of nomenclature tables
shawntanzk Jul 27, 2021
2db1281
Marmoset dendrogram
shawntanzk Jul 27, 2021
922c56e
Update CS202002013_Allen_markers.tsv
shawntanzk Aug 4, 2021
51f9a46
Update CS202002013_Allen_markers.tsv
shawntanzk Aug 4, 2021
545cc01
X-like GABAergic Implementation (Mus)
shawntanzk Aug 5, 2021
ea33c62
Update taxonomy_details.yaml
shawntanzk Aug 13, 2021
edc1762
Update taxonomy_details.yaml
shawntanzk Aug 13, 2021
1f80da5
source and tests adapted to the new nomenclature table structure
hkir-dev Aug 13, 2021
c6827f6
Merge branch '16Jun21-Dendrogram-Update' of https://github.com/obophe…
hkir-dev Aug 13, 2021
40a0cac
Update taxonomy_details.yaml
shawntanzk Aug 13, 2021
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8,983 changes: 8,983 additions & 0 deletions src/dendrograms/CCN201912131.json
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6,266 changes: 6,266 additions & 0 deletions src/dendrograms/CCN201912132.json
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1,771 changes: 1,232 additions & 539 deletions src/dendrograms/CCN202002013.json
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Binary file modified src/dendrograms/cell_set_nomenclature.xlsx
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181 changes: 181 additions & 0 deletions src/dendrograms/nomenclature_table_CCN201912131.csv
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136 changes: 136 additions & 0 deletions src/dendrograms/nomenclature_table_CCN201912132.csv
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111 changes: 111 additions & 0 deletions src/dendrograms/nomenclature_table_CCN202002011.csv
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108 changes: 108 additions & 0 deletions src/dendrograms/nomenclature_table_CCN202002012.csv
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520 changes: 258 additions & 262 deletions src/dendrograms/nomenclature_table_CCN202002013.csv
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59 changes: 59 additions & 0 deletions src/dendrograms/nomenclature_table_CCN202002270.csv
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cell_set_preferred_alias,original_label,cell_set_label,cell_set_accession,cell_set_aligned_alias,cell_set_additional_alias,cell_set_alias_assignee,cell_set_alias_citation,cell_set_structure,cell_set_ontology_tag,taxonomy_id,species,modality,child_cell_set_accessions,cell_type_card
Lamp5_1,Lamp5_1,Integrated 01,CS202002270_1,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Lamp5_5,Lamp5_5,Integrated 02,CS202002270_2,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Lamp5_2,Lamp5_2,Integrated 03,CS202002270_3,,Lamp5 Rosehip,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Lamp5_3,Lamp5_3,Integrated 04,CS202002270_4,Lamp5 Lhx6,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Sncg_1,Sncg_1,Integrated 05,CS202002270_5,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Sncg_2,Sncg_2,Integrated 06,CS202002270_6,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Lamp5_4,Lamp5_4,Integrated 07,CS202002270_7,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Sncg_3,Sncg_3,Integrated 08,CS202002270_8,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Sncg_4,Sncg_4,Integrated 09,CS202002270_9,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Vip_1,Vip_1,Integrated 10,CS202002270_10,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Vip_2,Vip_2,Integrated 11,CS202002270_11,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Vip_3,Vip_3,Integrated 12,CS202002270_12,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Vip_4,Vip_4,Integrated 13,CS202002270_13,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Sst Chodl,Sst Chodl,Integrated 14,CS202002270_14,,Long-range projecting Sst,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Sst_1,Sst_1,Integrated 15,CS202002270_15,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Sst_2,Sst_2,Integrated 16,CS202002270_16,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Sst_4,Sst_4,Integrated 17,CS202002270_17,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Sst_3,Sst_3,Integrated 18,CS202002270_18,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Sst_5,Sst_5,Integrated 19,CS202002270_19,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Sst_6,Sst_6,Integrated 20,CS202002270_20,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Sst_7,Sst_7,Integrated 21,CS202002270_21,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Pvalb_1,Pvalb_1,Integrated 22,CS202002270_22,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Pvalb_2,Pvalb_2,Integrated 23,CS202002270_23,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Chandelier,Chandelier,Integrated 24,CS202002270_24,Chandelier,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
L2/3 IT,L2/3 IT,Integrated 25,CS202002270_25,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
L6 IT_1,L6 IT_1,Integrated 26,CS202002270_26,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
L6 IT_2,L6 IT_2,Integrated 27,CS202002270_27,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
L5 IT_1,L5 IT_1,Integrated 28,CS202002270_28,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
L5 IT_2,L5 IT_2,Integrated 29,CS202002270_29,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
L5 IT_3,L5 IT_3,Integrated 30,CS202002270_30,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
L6 IT_3,L6 IT_3,Integrated 31,CS202002270_31,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
L5 ET_1,L5 ET_1,Integrated 32,CS202002270_32,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
L5 ET_2,L5 ET_2,Integrated 33,CS202002270_33,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
L6 CT_1,L6 CT_1,Integrated 34,CS202002270_34,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
L6 CT_2,L6 CT_2,Integrated 35,CS202002270_35,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
L6b,L6b,Integrated 36,CS202002270_36,L6b,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
L5/6 NP,L5/6 NP,Integrated 37,CS202002270_37,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
OPC,OPC,Integrated 38,CS202002270_38,OPC,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Astro_1,Astro_1,Integrated 39,CS202002270_39,,ILA / fibrous astrocyte,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Astro_2,Astro_2,Integrated 40,CS202002270_40,,Protoplasmic astrocyte,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Oligo_1,Oligo_1,Integrated 41,CS202002270_41,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Oligo_2,Oligo_2,Integrated 42,CS202002270_42,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Endo,Endo,Integrated 43,CS202002270_43,Endothelial,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
VLMC,VLMC,Integrated 44,CS202002270_44,VLMC,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
Microglia/PVM,Microglia/PVM,Integrated 45,CS202002270_45,Microglia-PVM,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,,No
L5 ET,L5 ET,Integrated 32-33,CS202002270_53,L5 ET,Betz|L5 PT,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,CS202002270_32|CS202002270_33,No
Astro,Astro,Integrated 39-40,CS202002270_55,Astrocyte,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,CS202002270_39|CS202002270_40,No
Oligo,Oligo,Integrated 41-42,CS202002270_56,Oligodendrocyte,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,CS202002270_41|CS202002270_42,No
CGE/PoA,CGE/PoA,Integrated 01-13,CS202002270_57,CGE/PoA,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,CS202002270_1|CS202002270_2|CS202002270_3|CS202002270_4|CS202002270_5|CS202002270_6|CS202002270_7|CS202002270_8|CS202002270_9|CS202002270_10|CS202002270_11|CS202002270_12|CS202002270_13,No
MGE,MGE,Integrated 14-24,CS202002270_58,MGE,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,CS202002270_14|CS202002270_15|CS202002270_16|CS202002270_17|CS202002270_18|CS202002270_19|CS202002270_20|CS202002270_21|CS202002270_22|CS202002270_23|CS202002270_24,No
IT projecting,IT projecting,Integrated 25-31,CS202002270_59,IT projecting,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,CS202002270_25|CS202002270_26|CS202002270_27|CS202002270_28|CS202002270_29|CS202002270_30|CS202002270_31,No
Non-IT projecting,Non-IT projecting,Integrated 32-37,CS202002270_60,Non-IT projecting,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,CS202002270_32|CS202002270_33|CS202002270_34|CS202002270_35|CS202002270_36|CS202002270_37,No
Oligo-OPC,Oligo-OPC,"Integrated 38, 41-42",CS202002270_61,Oligodendrocyte-OPC,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,CS202002270_38|CS202002270_41|CS202002270_42,No
Other NN,Other NN,Integrated 43-45,CS202002270_62,Non-neural,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,CS202002270_43|CS202002270_44|CS202002270_45,No
GABAergic,GABAergic,Integrated 01-24,CS202002270_63,Neuronal: GABAergic,Inhibitory,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,CS202002270_1|CS202002270_2|CS202002270_3|CS202002270_4|CS202002270_5|CS202002270_6|CS202002270_7|CS202002270_8|CS202002270_9|CS202002270_10|CS202002270_11|CS202002270_12|CS202002270_13|CS202002270_14|CS202002270_15|CS202002270_16|CS202002270_17|CS202002270_18|CS202002270_19|CS202002270_20|CS202002270_21|CS202002270_22|CS202002270_23|CS202002270_24,No
Glutamatergic,Glutamatergic,Integrated 25-37,CS202002270_64,Neuronal: Glutamatergic,Excitatory,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,CS202002270_25|CS202002270_26|CS202002270_27|CS202002270_28|CS202002270_29|CS202002270_30|CS202002270_31|CS202002270_32|CS202002270_33|CS202002270_34|CS202002270_35|CS202002270_36|CS202002270_37,No
Non-Neuronal,Non-Neuronal,Integrated 38-42,CS202002270_65,Non-neuronal,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,CS202002270_38|CS202002270_39|CS202002270_40|CS202002270_41|CS202002270_42,No
All cells,All cells,Integrated 01-45,CS202002270_66,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002270,Human|Marmoset|Mouse,RNAseq,CS202002270_1|CS202002270_2|CS202002270_3|CS202002270_4|CS202002270_5|CS202002270_6|CS202002270_7|CS202002270_8|CS202002270_9|CS202002270_10|CS202002270_11|CS202002270_12|CS202002270_13|CS202002270_14|CS202002270_15|CS202002270_16|CS202002270_17|CS202002270_18|CS202002270_19|CS202002270_20|CS202002270_21|CS202002270_22|CS202002270_23|CS202002270_24|CS202002270_25|CS202002270_26|CS202002270_27|CS202002270_28|CS202002270_29|CS202002270_30|CS202002270_31|CS202002270_32|CS202002270_33|CS202002270_34|CS202002270_35|CS202002270_36|CS202002270_37|CS202002270_38|CS202002270_39|CS202002270_40|CS202002270_41|CS202002270_42|CS202002270_43|CS202002270_44|CS202002270_45,No
21 changes: 21 additions & 0 deletions src/dendrograms/nomenclature_table_CCN202002271.csv
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cell_set_preferred_alias,original_label,cell_set_label,cell_set_accession,cell_set_aligned_alias,cell_set_additional_alias,cell_set_alias_assignee,cell_set_alias_citation,cell_set_structure,cell_set_ontology_tag,taxonomy_id,species,modality,child_cell_set_accessions,cell_type_card
Exc L5 FEZF2 LOC106993015,Exc L5 FEZF2 LOC106993015,RNAseq 001,CS202002271_1,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002271,Macaque,RNAseq,,No
Exc L5 FEZF2 LOC114676463,Exc L5 FEZF2 LOC114676463,RNAseq 002,CS202002271_2,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002271,Macaque,RNAseq,,No
Exc L5 RORB LOC106992498,Exc L5 RORB LOC106992498,RNAseq 003,CS202002271_3,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002271,Macaque,RNAseq,,No
Exc L5 RORB COL13A1,Exc L5 RORB COL13A1,RNAseq 004,CS202002271_4,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002271,Macaque,RNAseq,,No
Exc L5 RORB LOC106992627,Exc L5 RORB LOC106992627,RNAseq 005,CS202002271_5,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002271,Macaque,RNAseq,,No
Exc L5 THEMIS THEMIS,Exc L5 THEMIS THEMIS,RNAseq 006,CS202002271_6,L6 IT,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002271,Macaque,RNAseq,,No
Exc L5 SLC17A7 NTNG2,Exc L5 SLC17A7 NTNG2,RNAseq 007,CS202002271_7,L6 IT Car3,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002271,Macaque,RNAseq,,No
Exc L5 SLC17A7 CCDC60,Exc L5 SLC17A7 CCDC60,RNAseq 008,CS202002271_8,L6 CT,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002271,Macaque,RNAseq,,No
Exc L5 SLC17A7 LOC114676287,Exc L5 SLC17A7 LOC114676287,RNAseq 009,CS202002271_9,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002271,Macaque,RNAseq,,No
Exc L5 SLC17A7 OTOGL,Exc L5 SLC17A7 OTOGL,RNAseq 010,CS202002271_10,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002271,Macaque,RNAseq,,No
Exc L5 SLC17A7 LOC114680213,Exc L5 SLC17A7 LOC114680213,RNAseq 011,CS202002271_11,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002271,Macaque,RNAseq,,No
Exc L5 SLC17A7 CORIN,Exc L5 SLC17A7 CORIN,RNAseq 012,CS202002271_12,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002271,Macaque,RNAseq,,No
Exc L5 SLC17A7 TLL1,Exc L5 SLC17A7 TLL1,RNAseq 013,CS202002271_13,,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002271,Macaque,RNAseq,,No
L5 ET,L5 ET,RNAseq 001-002,CS202002271_14,L5 ET,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002271,Macaque,RNAseq,CS202002271_1|CS202002271_2,No
L5 IT,L5 IT,RNAseq 003-005,CS202002271_15,L5 IT,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002271,Macaque,RNAseq,CS202002271_3|CS202002271_4|CS202002271_5,No
L6b,L6b,RNAseq 009-010,CS202002271_16,L6b,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002271,Macaque,RNAseq,CS202002271_9|CS202002271_10,No
L5/6 NP,L5/6 NP,RNAseq 011-013,CS202002271_17,L5/6 NP,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002271,Macaque,RNAseq,CS202002271_11|CS202002271_12|CS202002271_13,No
Non-IT projecting,Non-IT projecting,"RNAseq 001-002, 008-013",CS202002271_18,Non-IT projecting,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002271,Macaque,RNAseq,CS202002271_1|CS202002271_2|CS202002271_8|CS202002271_9|CS202002271_10|CS202002271_11|CS202002271_12|CS202002271_13,No
IT projecting,IT projecting,RNAseq 003-007,CS202002271_19,IT projecting,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002271,Macaque,RNAseq,CS202002271_3|CS202002271_4|CS202002271_5|CS202002271_6|CS202002271_7,No
Glutamatergic,Glutamatergic,RNAseq 001-013,CS202002271_20,Neuronal: Glutamatergic,,Nikolas Jorstad,10.1101/2020.03.31.016972,primary motor cortex,UBERON:0001384,CCN202002271,Macaque,RNAseq,CS202002271_1|CS202002271_2|CS202002271_3|CS202002271_4|CS202002271_5|CS202002271_6|CS202002271_7|CS202002271_8|CS202002271_9|CS202002271_10|CS202002271_11|CS202002271_12|CS202002271_13,No
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