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medial ocular gland additions based on ISBN:1118473523 and comments f…
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…rom Cindy. Issue #614
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cmungall committed Dec 3, 2014
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10 changes: 9 additions & 1 deletion uberon_edit.obo
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Expand Up @@ -111744,19 +111744,20 @@ xref: CALOHA:TS-1268
[Term]
id: UBERON:0015152 ! gland of ocular region
name: gland of ocular region
def: "A gland that is typically found in or near the orbital region, in or around either the medial or lateral canthi, and is typically associated with secretions onto the eyeball or associated ducts. Includes the Harderian, nictitans and lacrimal glands." [UBERON:cjm]
property_value: taxon_notes "the only orbital gland found in anuran amphibians is the Harderian[PMID:8843648]" xsd:string
property_value: taxon_notes "the only orbital gland found in anuran amphibians is either the Harderian or the lacrimal; if it is a lacrimal, then a progressive lateral migration of the lacrimal glands must occur through the amniotes[PMID:7559104]" xsd:string
synonym: "ocular gland" EXACT []
synonym: "orbital gland" RELATED []
intersection_of: UBERON:0002530 ! gland
intersection_of: part_of UBERON:0004088 ! ocular region
def: "A gland that is part of a orbital region." [OBOL:automatic]

[Term]
id: UBERON:0015153 ! medial gland of ocular region
name: medial gland of ocular region
def: "A gland that is located in the ocular region, nearer the inner canthi. Typically associated with or part of the nictitating membrane, when present" [PMID:7559104]
property_value: taxon_notes "the distinction between Harderian and nictitans gland is only valid in mammals - the medial ocular glands in other terapods are called Harderian glands regardless of their secretion[doi:10.1007/978-3-642-76685-5_2]" xsd:string
comment: Taxon notes: Rabbits, pigs and Mongolian gerbils have both a Harderian and a nictitans gland[ISBN:1118473523]
synonym: "Harderian gland" NARROW []
synonym: "medial ocular gland" EXACT []
synonym: "medial orbital gland" EXACT []
Expand All @@ -111783,8 +111784,11 @@ synonym: "gland of the third eyelid" BROAD [ncithesaurus:Gland_of_the_Third_Eyel
intersection_of: UBERON:0015153 ! medial gland of ocular region
intersection_of: produces UBERON:0022286 ! secretion of nictitans gland
relationship: part_of UBERON:0010207 ! nictitating membrane
relationship: present_in_taxon NCBITaxon:10047 {source="ISBN:1118473523"} ! Mongolian gerbil
relationship: never_in_taxon NCBITaxon:39107 {source="ISBN:1118473523"} ! Murinae
synonym: "glandula palpebra tertia superficialis" RELATED LATIN [PMID:7559104]
synonym: "superficial gland of the nictitating membrane" RELATED [PMID:7559104]
synonym: "superficial gland of the third eyelid" RELATED [ISBN:1118473523]
xref: ncithesaurus:Gland_of_the_Third_Eyelid ! gland of the third eyelid

[Term]
Expand Down Expand Up @@ -111828,6 +111832,7 @@ relationship: present_in_taxon NCBITaxon:9608 {source="https://sourceforge.net/p
relationship: present_in_taxon NCBITaxon:9681 {source="https://sourceforge.net/p/geneontology/ontology-requests/10639", source="PMID:6997222 "} ! Felidae
relationship: present_in_taxon NCBITaxon:9845 {source="https://sourceforge.net/p/geneontology/ontology-requests/10639", source="PMID:12969024"} ! Ruminantia
relationship: present_in_taxon NCBITaxon:9397 {source="https://sourceforge.net/p/geneontology/ontology-requests/10639", source="PMID:20665821"} ! Chiroptera
relationship: present_in_taxon NCBITaxon:10047 {source="ISBN:1118473523"} ! Mongolian gerbil
xref: ncithesaurus:Harderian_Gland ! Harderian Gland
xref: SCTID:41474005 ! Harderian gland structure
subset: organ_slim
Expand All @@ -111853,6 +111858,9 @@ relationship: produced_by UBERON:0004187 ! Harderian gland
id: UBERON:0022286 ! secretion of nictitans gland
name: secretion of nictitans gland
def: "A secretion that is produced by a nictitans gland, containing glycoprotein" [doi:10.1007/978-3-642-76685-5_2]
comment: Taxon notes: serous in horse [ISBN:1118473523]
comment: Taxon notes: seromucuous in cattle, cat and dog, elephant [ISBN:1118473523]
comment: Taxon notes: mostly mucuous in pig[ISBN:1118473523]
synonym: "nictitans gland secretion" EXACT []
synonym: "nictitans gland fluid" EXACT []
intersection_of: UBERON:0000456 ! bodily secretion
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