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Smc issue 306 #333

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wants to merge 86 commits into from
Closed

Smc issue 306 #333

wants to merge 86 commits into from

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osorensen
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First step towards #306

@osorensen
made a stupid R wrapper
946c0c9
@osorensen
first step done
d417259
@osorensen
updated news and version
113d5b0
@osorensen
styling
2ff1a72
@osorensen
updated R-CMD-check.yaml to see if it fixes windows failures
961d90c
@osorensen
Merge branch 'develop' into smc-issue-306
e23f3dc
@osorensen
Merge branch 'wrapper-issues-327-328' into smc-issue-306
51f73a3
@osorensen
compiled readme
f838653
@osorensen
changed R_obs to rankings #329
7c348b1
@osorensen
moved n_users out of Cpp
14bc172
@osorensen
added rho_init
8d32c29
@osorensen
added default alpha_init
a52a8b2
@osorensen
removed n_items argument from smc_mallows_new_users
de9fb65
@osorensen
changed Time to timesteps
90be59f
@osorensen
changed N to n_particles
b56cea2
@osorensen
updated vignette
1a4a5a3
@osorensen
functioning smc_mallows_update for new users
eca77fa
@osorensen
added update function, #331
44521b0
@osorensen
updated function name in vignette for consistency
7683b2b
@osorensen
working on bug fixing
49b1cab
@osorensen
added an extended test
6f07932
@osorensen
updating of correctness test
73963b0
@osorensen
Merge branch 'users-update-331' into smc-issue-306
4698657
@osorensen
updated documentation
d63bec6
@osorensen
updated vignette
9c227dd
@osorensen
created potato_partial data and removed unnecessary args
f8cceb5
@osorensen
removed burnin arg from plot.SMCMallows
2c5b64a
@osorensen
moved some new_item_rank stuff to R
bace483
@osorensen
introduced SMCMallowsNewUsers class
d5ac41f
@osorensen
checking if there is a bug in new_item_rank
b45b4a7
@osorensen
completed removed smc-specific updating fn for rho
2dabf5e
@osorensen
built
abc661e
@osorensen
got rid of alpha_max
15b41fd
@osorensen
removed unused arg from update_alpha
7ec780c
@osorensen
factored away smc_metropolis_hastings_alpha
67191de
@osorensen
added long-running test for SMC partial rankings
123cadd
@osorensen
simplified MCMC code
77feafd
@osorensen
factored out augmentation function
50c2a5b
@osorensen
got it almost working with uniform augmentation
b108796
@osorensen
working on pseudo proposal
e6cc8e8
@osorensen
both pseudo and uniform seem to be working well
6656188
@osorensen
refactored fwd and bwd into one
4ba9dc9
@osorensen
seriously slimming down by reusing
956377e
@osorensen
more refactoring
479a841
@osorensen
auto-detecting missing ranks as in MCMC
7a4bc36
@osorensen
removed unnecessary loop in initialize_missing_ranks
b78ca22
@osorensen
harmonized name for augmented data
adc0d50
@osorensen
small move in run_mcmc
a3e91ff
@osorensen
more refactoring
4d89f52
@osorensen
removed unused variable
f467737
@osorensen
removed another unused variable
019e163
@osorensen
initialized norm_wgt
96e1a13
@osorensen
removed unused variable
b832524
@osorensen
fixed bug in MCMC loop in SMC for rank augmentatino
234eeba
@osorensen
merged proposal functions between MCMC and SMC
bb2fa19
@osorensen
fixed chunk options in SMC vignette
1a7e950
@osorensen
removed non-running examples
fcd88c8
@osorensen
fixed rcmdchk
4a12f10
@osorensen osorensen closed this Nov 13, 2023
@osorensen osorensen deleted the smc-issue-306 branch November 29, 2023 13:03
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@osorensen @crispinomarta @wleoncio