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I updated my R install with the latest Achilles and SQLRender packages in order run against a CDM v5 database instance. Everything appears to work fine until I attempt to export the JSON. At this point, the query appears to be referring to vocabularies via numerical ID a la CDM v4 (1) rather than name (SNOMED)
exportToJson(pgConnectionDetails,"public", "achilles_results", "/Users/wstephens/ext/OHDSI/AchillesWeb-master/data/Test")
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0%Error executing SQL: Error in .jcall(s, "Ljava/sql/ResultSet;", "executeQuery", as.character(query)[1]): org.postgresql.util.PSQLException: ERROR: operator does not exist: character varying = integer
Hint: No operator matches the given name and argument type(s). You might need to add explicit type casts.
Position: 1075
An error report has been created at /Users/wstephens/errorReport.txt
Error in value[3L] : no loop for break/next, jumping to top level
The text was updated successfully, but these errors were encountered:
the vocabulary_id = 1 looks like that was from CDMv4. in v5 those are varchars. Could you ensure that you have the latest code, and that you are running the analysis specifying the correct cdm version?
I updated my R install with the latest Achilles and SQLRender packages in order run against a CDM v5 database instance. Everything appears to work fine until I attempt to export the JSON. At this point, the query appears to be referring to vocabularies via numerical ID a la CDM v4 (1) rather than name (SNOMED)
An error report has been created at /Users/wstephens/errorReport.txt
Error in value[3L] : no loop for break/next, jumping to top level
The text was updated successfully, but these errors were encountered: