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Clean up

Clean up #92

Workflow file for this run

---
name: Build
on:
push:
pull_request:
schedule:
- cron: '0 0 * * 0'
jobs:
build:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- name: Build
run: |
docker build -t bio-formats-octave .
- name: Prepare data
run: |
mkdir data
touch "data/test&sizeT=3.fake"
wget --user-agent GHA https://downloads.openmicroscopy.org/images/OME-TIFF/2016-06/tubhiswt-2D.zip && unzip tubhiswt-2D.zip && mv tubhiswt-2D data
- name: Test
shell: bash
run: |
docker run -t -v $(pwd)/data/:/data/ bio-formats-octave test.m /data/tubhiswt-2D/tubhiswt_C0.ome.tif
docker run -t -v $(pwd)/data/:/data/ bio-formats-octave test.m /data/test&sizeT=3.fake
# Push image to DockerHub
upload:
needs: build
if: startsWith(github.ref, 'refs/tags')
runs-on: ubuntu-latest
env:
name: openmicroscopy/bio-formats-octave
steps:
- name: Get other tags
id: gettags
uses: jupyterhub/action-major-minor-tag-calculator@v3
with:
githubToken: ${{ secrets.GITHUB_TOKEN }}
prefix: "${{ env.name }}:"
- name: Docker metadata
id: meta
uses: docker/metadata-action@v4
with:
images: ${{ env.name }}
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v1
- name: Login to DockerHub
uses: docker/login-action@v1
with:
username: ${{ secrets.DOCKER_USERNAME }}
password: ${{ secrets.DOCKER_PASSWORD }}
- name: Push to Docker Hub
uses: docker/build-push-action@v2
with:
tags: ${{ join(fromJson(steps.gettags.outputs.tags)) }}
labels: ${{ steps.meta.outputs.labels }}
push: true