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Performance and position count fixes for ND2 #1275

Merged
merged 13 commits into from Aug 25, 2014
Merged

Performance and position count fixes for ND2 #1275

merged 13 commits into from Aug 25, 2014

Commits on Aug 20, 2014

  1. Use the unique position coordinate count as backup method of setting … 

    …the position count
    @melissalinkert
    melissalinkert committed Aug 20, 2014
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  2. Improved metadata parsing 

    Channel names, emission wavelengths, exposure times, and physical
positions are now more completely recorded in MetadataStore.
    @melissalinkert
    melissalinkert committed Aug 20, 2014
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  3. Revert usage of addGlobalMetaList

    @melissalinkert
    melissalinkert committed Aug 20, 2014
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  4. Fix one more issue with setting the channel color

    @melissalinkert
    melissalinkert committed Aug 20, 2014
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  5. Use the unique Z position count as a last resort to determine the ser… 

    …ies count
    @melissalinkert
    melissalinkert committed Aug 20, 2014
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  6. Account for stage drift when counting unique Z positions

    @melissalinkert
    melissalinkert committed Aug 20, 2014
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  7. Moderate setId and openBytes performance improvements

    @melissalinkert
    melissalinkert committed Aug 20, 2014
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  8. Prevent seeking beyond the end of the file

    @melissalinkert
    melissalinkert committed Aug 20, 2014
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  9. One more set of performance changes 

    Reduces the number of skips, and removes System.arraycopy when a very
small number of bytes are being copied.
    @melissalinkert
    melissalinkert committed Aug 20, 2014
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  10. Replace erroneous call to addGlobalMetaList

    @melissalinkert
    melissalinkert committed Aug 20, 2014
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  11. One last removal of addGlobalMetaList

    @melissalinkert
    melissalinkert committed Aug 20, 2014
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  12. Fix dev_5_0-only compile error

    @melissalinkert
    melissalinkert committed Aug 20, 2014
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Commits on Aug 23, 2014

  1. Fix double => int wavelength parsing

    @melissalinkert
    melissalinkert committed Aug 23, 2014
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