Provide further command-line options. #12

mtbc · 2020-09-09T16:29:21Z

Fixes #7 and aids ome/design#20 by adding command-line options to cover those of omero::cmd::Duplicate.

mtbc · 2020-09-10T07:08:02Z

pip install -U https://codeload.github.com/snoopycrimecop/omero-cli-duplicate/zip/merge_ci for easy testing.

pwalczysko · 2020-09-10T10:10:49Z

    # Duplicate a project with the original images linked into its datasets
    omero duplicate Project:15 --reference-classes=Image

Not sure what that is supposed to do. I thought the duplicate by default does that anyway (duplicate a project implies duplicating all its Datasets and all the images in those datasets. What am I missing here ?

pwalczysko · 2020-09-10T10:12:39Z

# Reuse annotations except for duplicating comments and ratings

I would suggest replacing the work reuse with something more precise, like link the original annotations to the duplicates, do not duplicate the annotations

pwalczysko · 2020-09-10T10:14:07Z

  --duplicate-classes DUPLICATE_CLASSES
                                        Modifies the given option by specifying classes to duplicate

Wonder when would I use that ? An example would be handy.

Aha, sorry, it is there, in the last example

pwalczysko · 2020-09-10T10:15:56Z

Could we maybe go away from the word classes ? Objects would be a fine replacement by me

mtbc · 2020-09-10T10:20:57Z

By default duplicate links duplicate images into the datasets, not the originals. --reference-classes=Image won't duplicate images.

"something more precise" goes way off the end of the line, that's okay? I was trying to do what I could while keeping it short.

"classes" to match the description of the other options like "--include", they seem to be classes elsewhere in CLI-speak. "objects" I'd be more likely to interpret as being instances rather than kinds.

pwalczysko · 2020-09-10T10:38:48Z

...way off the end of the line, that's okay?

More okay imho than to leave room for unclarity.

pwalczysko · 2020-09-10T10:42:14Z

Trying to link some annotations on the original to the duplicates in read-only group leads to failure, as kind of expected ... We need to think about this case at least for the webclient though @will-moore (in the example below, user-8 is trying to duplicate user-2's Project and link the Tags from the original to the duplicate by passing --reference-classes=Annotation:

(env562) pwalczysko@ls31618~$ omero duplicate Project:23308 --reference-classes=Annotation --duplicate-classes=CommentAnnotation,LongAnnotation --report
Using session for user-8@merge-ci-devspace.openmicroscopy.org:4064. Idle timeout: 10 min. Current group: read-only-1
omero.cmd.Duplicate Project:23308 failed: 'graph-fail'
	message=Group is rwr---. Cannot link to object: ome.model.annotations.TagAnnotation:Id_57735
	stacktrace=ome.conditions.SecurityViolation: Group is rwr---. Cannot link to object: ome.model.annotations.TagAnnotation:Id_57735
	at ome.security.basic.OmeroInterceptor.throwIfNotGranted(OmeroInterceptor.java:1270)
	at ome.security.basic.OmeroInterceptor.evaluateLinkages(OmeroInterceptor.java:628)
....

pwalczysko · 2020-09-10T10:49:04Z

All taken on #12 (comment). Re-reading the help, I think my main tripping point is that I did not get the reference as meaning link and thus missed the whole concept of either linking (some of) the original objects to duplicates, or, instead, duplicating (some of) the objects.
Could we maybe remove the reference wording in favor of link or linking and similar ?

Modifies the given option by specifying classes to reference

pwalczysko · 2020-09-10T11:38:08Z

Problem when tried to duplicate a dataset with exclusion of ROIs and FileAnnotations.

(env562) pwalczysko@ls31618~$ omero duplicate Dataset:4152 --ignore-classes=Roi,FileAnnotation --report
Using session for user-3@merge-ci-devspace.openmicroscopy.org:4064. Idle timeout: 10 min. Current group: public
omero.cmd.Duplicate Dataset:4152 failed: 'graph-fail'
	message=not-null property references a null or transient value: ome.model.annotations.DatasetAnnotationLink.child
	stacktrace=org.hibernate.PropertyValueException: not-null property references a null or transient value: ome.model.annotations.DatasetAnnotationLink.child
	at org.hibernate.engine.Nullability.checkNullability(Nullability.java:100)
	at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:312)
	at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:203)
	at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:143)
	at org.hibernate.event.def.DefaultPersistEventListener.entityIsTransient(DefaultPersistEventListener.java:201)
	at org.hibernate.event.def.DefaultPersistEventListener.onPersist(DefaultPersistEventListener.java:147)
	at org.hibernate.event.def.DefaultPersistEventListener.onPersist(DefaultPersistEventListener.java:71)
	at org.hibernate.impl.SessionImpl.firePersist(SessionImpl.java:808)
	at org.hibernate.impl.SessionImpl.persist(SessionImpl.java:782)
	at org.hibernate.impl.SessionImpl.persist(SessionImpl.java:786)
	at sun.reflect.GeneratedMethodAccessor2383.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:498)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
	at ome.tools.hibernate.SessionFactory.invoke(SessionFactory.java:105)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
	at com.sun.proxy.$Proxy74.persist(Unknown Source)
	at omero.cmd.graphs.DuplicateI.persistDuplicatesWithNewPropertyValues(DuplicateI.java:740)
	at omero.cmd.graphs.DuplicateI.step(DuplicateI.java:1028)
	at omero.cmd.HandleI.steps(HandleI.java:448)
	at omero.cmd.HandleI$RunSteps.innerWork(HandleI.java:509)
	at omero.cmd.HandleI$2.doWork(HandleI.java:383)
	at omero.cmd.HandleI$2.doWork(HandleI.java:380)
	at sun.reflect.GeneratedMethodAccessor303.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:498)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
	at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
	at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
	at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
	at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
	at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
	at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
	at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
	at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
	at com.sun.proxy.$Proxy73.doWork(Unknown Source)
	at ome.services.util.Executor$Impl.execute(Executor.java:447)
	at omero.cmd.HandleI.run(HandleI.java:379)
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
	at ome.services.util.Executor$Impl$1.call(Executor.java:488)
	at java.util.concurrent.FutureTask.run(FutureTask.java:266)
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
	at java.lang.Thread.run(Thread.java:748)

mtbc · 2020-09-10T11:42:58Z

That one's a tricky one. In read-annotate you can reference the attachments but in read-only you may need the blunt instrument of --ignore-classes=IAnnotationLink.

pwalczysko · 2020-09-10T11:53:20Z

in read-only you may need the blunt instrument of --ignore-classes=IAnnotationLink.

That will be hard to explain to users. I actually do not understand myself why that should be the case. Is it possible to change it ?

Also, the behaviour is actually erratic then - or at least it appears so. I have first run the command with exclusion of Roi only, and it did not error, it was just not returning for a long time.

mtbc · 2020-09-10T12:10:29Z

Not easily changed. Could be worth an issue but there is already a ton of graphs-related RFE (if we include Trello cards).

The issue is basically one of lookahead and class distinctions. RoIs don't have a separate kind of linking object at all so they don't run into this issue, you should be able to --ignore-classes=Roi just fine. However, links from images to comments are of the same kind as links from images to tags so with the class-based selectors there is no way to say, for example, "ignore links to attachments but duplicate links to comments". What you ran into was that it was duplicating the link from the dataset to the attachment but the link had nothing it could point to (as attachments were ignored) and there is no clever machinery to see that problem in advance or recover from it when it occurs.

In read-annotate at least one can fall back to referencing instead so the duplicate link still has somewhere to point but the class-based selectors and same-link-kinds mean that for read-only one can ignore all links from datasets to annotations or none.

@pwalczysko

suggested by @pwalczysko

pwalczysko · 2020-09-10T14:58:51Z

Re #12 (comment)

for read-only one can ignore all links from datasets to annotations or none.

Tried to do just that, but that failed too, see below

(env562) pwalczysko@ls31618~$ omero duplicate Dataset:4152 --ignore-classes=Annotation --report
Using session for user-3@merge-ci-devspace.openmicroscopy.org:4064. Idle timeout: 10 min. Current group: public
omero.cmd.Duplicate Dataset:4152 failed: 'graph-fail'
	message=not-null property references a null or transient value: ome.model.annotations.FilesetAnnotationLink.child
	stacktrace=org.hibernate.PropertyValueException: not-null property references a null or transient value: ome.model.annotations.FilesetAnnotationLink.child
	at org.hibernate.engine.Nullability.checkNullability(Nullability.java:100)
	at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:312)
	at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:203)
	at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:143)
	at org.hibernate.event.def.DefaultPersistEventListener.entityIsTransient(DefaultPersistEventListener.java:201)

mtbc · 2020-09-10T15:20:28Z

Try --ignore-classes=DatasetAnnotationLink. The ignorings need to target the links.

pwalczysko · 2020-09-10T16:46:06Z

Try --ignore-classes=DatasetAnnotationLink. The ignorings need to target the links.

@mtbc yes, thank you. I think I got it finally, see below please. Although finally successful, we should think how to give this as an example in the help text, because no way it is intiutive or even deducible.

Insert an example when in RO group and specify in that example that links have to be singled out
Insert an example sstating (maybe again in RO group) that shows that ROIs can be gotten rid of even in RO group, i.e. they are exceptional in the sense that there is no link (all that explanation might be swallowed, but the ROI example might just say "possible also in RO group".

(env562) pwalczysko@ls31618~$ omero duplicate Dataset:4152 --ignore-classes=DatasetAnnotationLink,ImageAnnotationLink,Roi --report
Using session for user-3@merge-ci-devspace.openmicroscopy.org:4064. Idle timeout: 10 min. Current group: public
omero.cmd.Duplicate Dataset:4152 ok
Steps: 14
Elapsed time: 244.833 secs.
Flags: []
Duplicates
  CommentAnnotation:57779-57789
  FilesetAnnotationLink:5027-5037
  Dataset:25524
  DatasetImageLink:86691-86705
  Channel:366992-367021
  Image:143052-143066
...

pwalczysko · 2020-09-11T10:07:44Z

src/omero/plugins/duplicate.py

+        "    omero duplicate Project:15 --reference-classes=Annotation "
+        "--duplicate-classes=CommentAnnotation,LongAnnotation\n"
+        """
+Group permissions can prevent simply referencing an Image or Annotation.


Suggested change

Group permissions can prevent simply referencing an Image or Annotation.

Group permissions can prevent simply linking an Image or Annotation.

Maybe this is not optimal suggestion.
How would "referencing for linking" sound ? Or maybe Group permissions can prevent simply referencing an Image or Annotation because the subsequent linking is not possible.

?

pwalczysko · 2020-09-11T10:12:22Z

One formulation suggestion, otherwise looks good and works as expected.
I am confident now that I can grasp the behaviour and explain to @will-moore if necessary.

pwalczysko · 2020-09-11T15:33:35Z

The last two commits look good as well.

joshmoore

Few CLI usability comments.

joshmoore · 2020-09-14T08:00:35Z

src/omero/plugins/duplicate.py

@@ -61,6 +72,38 @@ def cmd_type(self):
        import omero.all
        return omero.cmd.Duplicate

+    def _pre_objects(self, parser):
+        parser.add_argument(
+            "--duplicate-classes",


I could see dropping --classes here and perhaps adding a short-cut, -D.

It's largely the default anyway.

I don't assume there's a way to list what the server will do by default, is there?

This is basically what --dry-run does but, generally, the name of the subcommand is a big hint.

Hmm... I don't know.

omero duplicate --dry-run Image:160 --report omero.cmd.Duplicate Image:160 Dry run performed ... Duplicates Arc:107 Detector:22 DetectorSettings:22 ...

doesn't really give me a sense of the default parameters to know what I can change from "duplicate" to "reference". Are there any that default to "reference" (or even "ignore")?

Nothing's jumping to my mind apart from things like how details.owner are effectively ignored but that can't be overridden with --duplicate anyway. Generally the only "do a different thing by default" going on with graphs operations is when it switches to deleting, e.g., removing somebody else's comments when you move an image into a private group (also not overridable), but duplicate never switches to deletion.

joshmoore · 2020-09-14T08:01:21Z

src/omero/plugins/duplicate.py

+    def _pre_objects(self, parser):
+        parser.add_argument(
+            "--duplicate-classes",
+            help=("Modifies the given option by specifying kinds of object to "


I could see dropping "Modifies the given option by". Perhaps, "Specify kind of object to duplicate"

joshmoore · 2020-09-14T08:02:06Z

src/omero/plugins/duplicate.py

+            help=("Modifies the given option by specifying kinds of object to "
+                  "link to instead of duplicate"))
+        parser.add_argument(
+            "--ignore-classes",


These could conceivable be marked nargs="+" to handle -R Foo -R Bar.

That one's new to me so have created ome/omero-py#253 as a start.

joshmoore · 2020-09-14T08:02:40Z

src/omero/plugins/duplicate.py

+            help=("Modifies the given option by specifying kinds of object to "
+                  "duplicate"))
+        parser.add_argument(
+            "--reference-classes",


choices = tuple([x[:-1] for x in dir(omero.model) if x.endswith("I")]) or similar would be able to detect typos in the arguments.

Unfortunately that includes classes like Event which aren't permitted and omits the example's Annotation which is; I don't think we have an easy way here to get a good list of choices.

Encoding that logic along with the other base graph methods would probably produce something maintainable:

def get_graph_targets(): - load all classes - remove events and other known problems - add "Annotations" and other necessary base classes

If not asking the server then probably best done with some codegen adjustments. Marker interfaces like IAnnotationLink are also available.

Noted in ome/omero-blitz#107.

joshmoore · 2020-09-14T08:06:33Z

src/omero/plugins/duplicate.py

@@ -28,15 +28,10 @@

 from omero.cli import CLI, GraphControl

-HELP = """Duplicate OMERO data.
+HELP = ("""Duplicate OMERO data.


This 3 word intro could likely be dropped in favor of the next sentence:

usage: ./.venv3/bin/omero duplicate [-h] [--wait WAIT] [--include INCLUDE] [--exclude EXCLUDE] [--ordered] [--list] [--report] [--dry-run] [--force] [--duplicate-classes DUPLICATE_CLASSES] [--reference-classes REFERENCE_CLASSES] [--ignore-classes IGNORE_CLASSES] [obj [obj ...]] Duplicate OMERO data. Duplicate entire graphs of data based on the ID of the top-node.

joshmoore · 2020-09-14T08:07:12Z

src/omero/plugins/duplicate.py

+        "    omero duplicate Project:15 --reference-classes=Annotation "
+        "--duplicate-classes=CommentAnnotation,LongAnnotation\n"
+        """
+Group permissions can prevent a duplicated link from referencing another


I'm skeptical that this paragraph is going to be understandable by most. Is there any chance of detecting this particular error and then saying, "you will need to modify your parameters"?

Or perhaps at least, I'd begin with a more friendly text describing things in general, and then prefix this paragraph with Warning/Details/Notice etc.

https://trello.com/c/F4cAE0k3/358-graphexception-subclasses may be the best approach there though it'd also require analysis to figure what else can cause the same condition.

joshmoore · 2020-09-14T08:07:47Z

src/omero/plugins/duplicate.py

+            help=("Modifies the given option by specifying kinds of object to "
+                  "duplicate"))
+        parser.add_argument(
+            "--reference-classes",


Add metavar="CLASS" (or "TYPE")

@joshmoore

suggested by @joshmoore

@joshmoore

suggested by @joshmoore

@joshmoore

suggested by @joshmoore

@joshmoore

suggested by @joshmoore

@joshmoore

suggested by @joshmoore

mtbc · 2020-09-16T08:54:00Z

For testing one can adjust the "omero.cmd.graphs" line in logback.xml from INFO to DEBUG to get a full report in Blitz-0.log of the options that the CLI sent to the server.

joshmoore

Few minor comments but the help is generally looking much more usable. Thank you.

joshmoore · 2020-09-16T10:11:11Z

src/omero/plugins/duplicate.py

+By default, a whole subtree of OMERO model objects is duplicated. One
+may opt to have duplicate objects reference original parts of the
+subtree instead of also duplicating those, see the "--reference" option
+below. More strongly, one may "--ignore" given kinds of model object


model object seemed odd here in the singular.

joshmoore · 2020-09-16T10:12:45Z

src/omero/plugins/duplicate.py

@@ -61,6 +78,44 @@ def cmd_type(self):
        import omero.all
        return omero.cmd.Duplicate

+    def _pre_objects(self, parser):
+        parser.add_argument(
+            "--duplicate",


You decided against the short-cuts?

Yes, given that we shortened from --duplicate-classes and I imagined you might have initially thought --duplicate would be used more often than I'd guess, given that it overrides overrides to put them back to default. We haven't much done it elsewhere, e.g., for --include or --dry-run or whatever. Could still do it if it brings enough value, maybe capital letters to reduce conflicts with non-graph-command options.

joshmoore · 2020-09-16T10:13:27Z

src/omero/plugins/duplicate.py

+        "--duplicate=CommentAnnotation,LongAnnotation\n"
+        """
+Group permissions can prevent a duplicated link from referencing another
+user's Image or Annotation. However, note that ignoring a linked-to


i.e. it will throw an exception?

@joshmoore Yes, see #12 (comment)

Sorry, I'm pointing out we may want to say that to the user.

will-moore · 2020-09-16T11:13:05Z

src/omero/plugins/duplicate.py

 """
+        "    # Duplicate a project, linking to the original annotations "


Is there a reason for the extra """ and separately quoted lines here?

Minor point - shouldn't we use Project instead of project to refer to objects? Also it's more consistent with the commands themselves.

Stops flake8 complaining about the long line.

I'm trying to be consistent with the other CLI graphs command help text, this PR was originally just adapted from GraphControl methods which is why some of the suggested changes here I've mirrored back into omero-py. Certainly open to reworking it all but perhaps could be a separate effort given how many related subcommands there are.

pwalczysko · 2020-09-16T14:24:01Z

I like the new wording of the help. I would

also lean towards the plural of objects in sentences like discussed in Provide further command-line options. #12 (comment)
why is there actually the = sign syntax when using the flags ? The main help text does not suggest the equal sign, you can read it only from the examples, such as

--duplicate=CommentAnnotation,LongAnnotation\n

mtbc · 2020-09-16T16:02:41Z

Oops, now more commits than ome/omero-blitz#100. 😆

joshmoore · 2020-09-16T17:41:30Z

why is there actually the = sign syntax when using the flags ? The main help text does not suggest the equal sign, you can read it only from the examples, such as

For most people familiar with the command line, it should be understood that the equals is optional. --foo=bar is equivalent to --foo bar. We certainly don't have a style-guide entry preferring one over the other and I would not think we want to proscriptive. (ergo, for this PR, I also don't mind one way or the other)

joshmoore

Today's help looks good. The issue with the short arguments (e.g. -D) can be addressed later. Release (0.4.0?) will need to be coordinated.

Add command-line options for corresponding request options.

cdeb1c3

mtbc mentioned this pull request Sep 9, 2020

Test new command-line options for CLI duplicate. ome/openmicroscopy#6251

Merged

Adjust help documentation wording.

e918bca

suggested by @pwalczysko

mtbc added 2 commits September 11, 2020 09:16

Add help text about ignoring link classes, not link targets.

f439ff4

Remove obsolete text about missing pixel data.

b7c3b08

pwalczysko reviewed Sep 11, 2020

View reviewed changes

mtbc added 2 commits September 11, 2020 14:19

Mentioning linking along with referencing.

ec6d07d

Rewrap help text paragraph, whitespace only.

e49296b

pwalczysko approved these changes Sep 11, 2020

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joshmoore reviewed Sep 14, 2020

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mtbc added 2 commits September 14, 2020 11:01

Drop -classes from related command-line options.

9fc329e

suggested by @joshmoore

Unite initial documentation sentences.

27bc439

mtbc added 2 commits September 14, 2020 11:10

Add metavar to options for parsing.

975785e

suggested by @joshmoore

Drop "Modifies the given option by ..." wording.

4f4b926

suggested by @joshmoore

mtbc mentioned this pull request Sep 14, 2020

Adjust how --include and --exclude are presented as options. ome/omero-py#252

Merged

mtbc added 2 commits September 14, 2020 12:57

Add further explanatory text about Duplicate's options.

5f17354

suggested by @joshmoore

Use nargs="+" for graph classes arguments.

f0e3746

suggested by @joshmoore

joshmoore reviewed Sep 16, 2020

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will-moore reviewed Sep 16, 2020

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mtbc added 2 commits September 16, 2020 12:17

Further rework help text.

11bfd33

rewrap paragraphs, whitespace only

1e2f4f6

mtbc added 3 commits September 16, 2020 15:48

Further rework help text.

13e5a53

rewrap paragraphs, whitespace only

e664039

Drop unnecessary = from options examples.

dc06ba3

joshmoore approved these changes Sep 17, 2020

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joshmoore merged commit f2b3c7d into ome:master Sep 17, 2020

mtbc deleted the extend-CLI-duplicate branch September 17, 2020 09:16

pwalczysko mentioned this pull request Sep 18, 2020

Deep copy ome/omero-guide-introduction#14

Open

mtbc mentioned this pull request Sep 24, 2020

Update changelog for release of v0.4.0. #16

Merged

	Group permissions can prevent simply referencing an Image or Annotation.
	Group permissions can prevent simply linking an Image or Annotation.

		"""
		" # Duplicate a project, linking to the original annotations "

Provide further command-line options. #12

Provide further command-line options. #12

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pwalczysko commented Sep 16, 2020

mtbc commented Sep 16, 2020 • edited Loading

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pwalczysko commented Sep 10, 2020 •

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pwalczysko commented Sep 10, 2020 •

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pwalczysko commented Sep 10, 2020 •

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pwalczysko commented Sep 10, 2020 •

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mtbc Sep 14, 2020 •

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joshmoore Sep 14, 2020 •

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mtbc Sep 14, 2020 •

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mtbc commented Sep 16, 2020 •

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mtbc commented Sep 16, 2020 •

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