Server installation #2036
Server installation #2036
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Conflicting PR. Removed from build OMERO-docs-superbuild-push#25. See the console output for more details.
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My fault, @jburel. I accidentally included files that were code-generated. They've now been removed. |
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Thanks |
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Following today's discussion, the walkthroughs will need to be reviewed. |
omero/sysadmins/server-tables.rst
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| @@ -90,7 +90,7 @@ After that, the following should succeed: | |||
| your operating system's package installer if possible or if you must | |||
| instead use PyPI_ directly:: | |||
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| pip install mock | |||
| pip3 install mock | |||
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FYI need to be careful with pip / pip3. Sometimes the 3 version is missing from a virtualenv in which case pip3 might refer to a global pip. Something to check later.
| @@ -15,11 +15,11 @@ yum -y install java-1.8.0-openjdk | |||
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| # install dependencies | |||
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| yum -y install python-{pip,devel,virtualenv,yaml,jinja2,tables} | |||
| yum -y install python3-{pip,devel,virtualenv,yaml,jinja2,tables} | |||
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| yum -y install python3-{pip,devel,virtualenv,yaml,jinja2,tables} | |
| yum -y install python3 |
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Those changes are made in omero-install so they will be overridden
| @@ -30,8 +30,6 @@ yum -y install libdb-utils | |||
| yum -y install openssl-devel bzip2-devel | |||
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I don't think these are necessary if everything is installed using wheels
| OMERO.server/bin/omero config set omero.db.pass "$OMERO_DB_PASS" | ||
| OMERO.server/bin/omero db script -f OMERO.server/db.sql --password "$OMERO_ROOT_PASS" | ||
| # set OMERODIR | ||
| export OMERODIR=OMERO.server |
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probably safer to use the full absolute path
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this has been changed in omero-install
| @@ -18,24 +18,23 @@ apt-get -y install openjdk-8-jre-headless | |||
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| # install dependencies | |||
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| apt-get -y install python-{pip,virtualenv,yaml,jinja2} | |||
| apt-get -y install python3-{pip,venv,yaml,jinja2} | |||
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| apt-get -y install python3-{pip,venv,yaml,jinja2} | |
| apt-get -y install python3-{pip,venv} |
Co-Authored-By: Simon Li <orpheus+devel@gmail.com>
Co-Authored-By: Simon Li <orpheus+devel@gmail.com>
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@manics changes to the walkthroughs have to be done in omero-install. |
Co-Authored-By: Simon Li <orpheus+devel@gmail.com>
Co-Authored-By: Simon Li <orpheus+devel@gmail.com>
Co-Authored-By: Simon Li <orpheus+devel@gmail.com>
Co-Authored-By: Simon Li <orpheus+devel@gmail.com>
Co-Authored-By: Simon Li <orpheus+devel@gmail.com>
Co-Authored-By: Simon Li <orpheus+devel@gmail.com>
Co-Authored-By: Simon Li <orpheus+devel@gmail.com>
Co-Authored-By: Simon Li <orpheus+devel@gmail.com>
Co-Authored-By: Simon Li <orpheus+devel@gmail.com>
Review installation instructions