Group view 10243

components/tools/OmeroPy/src/omero/gateway/__init__.py

@@ -478,12 +478,10 @@ def canLink(self):
         """
         Determines whether user can create 'hard' links (Not annotation links).
         E.g. Between Project/Dataset/Image etc.
-        We have decided to restrict the clients to only allow the OWNER of data
-        to create these links.
-        The server is more permissive. To see what the server will allow,
-        use self.getDetails().getPermissions().canLink()
+        Previously (4.4.6 and earlier) we only allowed this for object owners, but now we delegate
+        to what the server will allow.
         """
-        return self.isOwned()
+        return self.getDetails().getPermissions().canLink()
 
     def canAnnotate(self):
         """

components/tools/OmeroWeb/omeroweb/webclient/controller/container.py

@@ -253,10 +253,12 @@ def channelMetadata(self):
 
     def loadTags(self, eid=None):
         if eid is not None:
-            self.experimenter = self.conn.getObject("Experimenter", eid)
+            if eid == -1:       # Load data for all users
+                eid = None
+            else:
+                self.experimenter = self.conn.getObject("Experimenter", eid)
         else:            
             eid = self.conn.getEventContext().userId
-
         self.tags = list(self.conn.listTags(eid))
         self.t_size = len(self.tags)
 
@@ -281,7 +283,10 @@ def loadDataByTag(self):
 
     def listImagesInDataset(self, did, eid=None, page=None, load_pixels=False):
         if eid is not None:
-            self.experimenter = self.conn.getObject("Experimenter", eid)  
+            if eid == -1:       # Load data for all users
+                eid = None
+            else:
+                self.experimenter = self.conn.getObject("Experimenter", eid)
         im_list = list(self.conn.listImagesInDataset(oid=did, eid=eid, page=page, load_pixels=load_pixels))
         im_list.sort(key=lambda x: x.getName().lower())
         self.containers = {'images': im_list}
@@ -292,10 +297,12 @@ def listImagesInDataset(self, did, eid=None, page=None, load_pixels=False):
 
     def listContainerHierarchy(self, eid=None):
         if eid is not None:
-            self.experimenter = self.conn.getObject("Experimenter", eid)
+            if eid == -1:
+                eid = None
+            else:
+                self.experimenter = self.conn.getObject("Experimenter", eid)
         else:
             eid = self.conn.getEventContext().userId
-
         pr_list = list(self.conn.listProjects(eid))
         ds_list = list(self.conn.listOrphans("Dataset", eid))
         sc_list = list(self.conn.listScreens(eid))
@@ -313,7 +320,10 @@ def listContainerHierarchy(self, eid=None):
 
     def listOrphanedImages(self, eid=None, page=None):
         if eid is not None:
-            self.experimenter = self.conn.getObject("Experimenter", eid)
+            if eid == -1:
+                eid = None
+            else:
+                self.experimenter = self.conn.getObject("Experimenter", eid)
         else:
             eid = self.conn.getEventContext().userId
 
@@ -946,13 +956,10 @@ def move(self, parent, destination):
                 if parent[0] != destination[0]:
                     up_spl = None
                     spls = list(self.plate.getParentLinks()) #gets every links for child
-                    if len(spls) == 1:
-                        # gets old parent to delete
-                        if spls[0].parent.id.val == long(parent[1]):
-                            up_spl = spls[0]
-                            self.conn.deleteObjectDirect(up_spl._obj)
-                    else:
-                        return 'This plate is linked in multiple places. Please unlink the plate first.'
+                    for spl in spls:
+                        if spl.parent.id.val == long(parent[1]):
+                            self.conn.deleteObjectDirect(spl._obj)
+                            break
             else:
                 return 'Destination not supported.'
         else:

components/tools/OmeroWeb/omeroweb/webclient/templates/webclient/annotations/metadata_general.html

@@ -160,19 +160,19 @@
                 $("#comments_container").on("click", ".removeComment", function(event){
                     var url = $(this).attr('url');
                     OME.removeItem(event, ".ann_comment_wrapper", 
-                        url, $.trim($("#object-id").text()), {{ index }});
+                        url, $.trim($("#object-id").text()), {{ index|default:"0" }});
                     return false;
                 });
                 $("#tags_container").on("click", ".removeTag", function(event){
                     var url = $(this).attr('url');
                     OME.removeItem(event, ".tag_annotation_wrapper", url, 
-                        $.trim($("#object-id").text()), {{ index }});
+                        $.trim($("#object-id").text()), {{ index|default:"0" }});
                     return false;
                 });
                 $("#fileanns_container").on("click", ".removeFile", function(event) {
                     var url = $(this).attr('href');
                     OME.removeItem(event, ".file_ann_wrapper", url, 
-                        $.trim($("#object-id").text()), {{ index }});
+                        $.trim($("#object-id").text()), {{ index|default:"0" }});
                     return false;
                 });
 

components/tools/OmeroWeb/omeroweb/webclient/templates/webclient/base/includes/group_user_dropdown.html

@@ -130,6 +130,16 @@
                         {{ grp.getName }}
                     </a>
                     <ul title="Switch to this Group and User">
+                        <li>
+                            {% ifequal grp.id active_group.id %}
+                            <a href="{{ current_url }}?experimenter=-1">
+                                <!-- otherwise we switch group too -->
+                            {% else %}
+                            <a href="{% url change_active_group %}?active_group={{grp.id}}&url={{ current_url }}?experimenter=-1">
+                            {% endifequal %}
+                                All members
+                            </a>
+                        </li>
                         {% if grp.leaders %}
                             <li class="non_selectable"><strong>Owners</strong></li>
                             {% for user in grp.leaders %}

components/tools/OmeroWeb/omeroweb/webclient/templates/webclient/data/container_subtree.html

@@ -24,15 +24,25 @@
 {% if manager.containers.orphaned %}
     {% if manager.containers.images %}
     {% for d in manager.containers.images %}
-        <li id='image-{{ d.id }}' rel="image{% if not d.canEdit %}-locked{% endif %}" class="{{ d.getPermsCss }}"><a href="#">{{ d.name|default:"Image"|truncatebefor:"30" }}</a>
+        <li id='image-{{ d.id }}' rel="image{% if not d.isOwned %}-locked{% endif %}" class="{{ d.getPermsCss }}"><a href="#">{{ d.name|default:"Image"|truncatebefor:"30" }}</a>
         </li>
     {% endfor %}
     {% endif %}
 {% else %}
     {% if manager.containers.images %}
     {% for d in manager.containers.images %}
-        <li id='image-{{ d.id }}' rel="image{% if not d.canEdit %}-locked{% endif %}" class="{{ d.getPermsCss }}"><a href="#">{{ d.name|default:"Image"|truncatebefor:"30" }}</a>
+        <li id='image-{{ d.id }}' rel="image{% if not d.isOwned %}-locked{% endif %}" class="{{ d.getPermsCss }}"><a href="#">{{ d.name|default:"Image"|truncatebefor:"30" }}</a>
         </li>
     {% endfor %}
     {% endif %}
+{% endif %}
+
+{% if manager.plate %}
+    {% if manager.plate.countPlateAcquisitions %}
+        {% for e in manager.plate.listPlateAcquisitions %}
+            <li id='acquisition-{{ e.id }}' rel="acquisition{% if not e.isOwned %}-locked{% endif %}" class="{{ e.getPermsCss }}">
+                <a href="#">{{ e.name|default:"Run"|truncatebefor:"35" }}</a>
+            </li>
+        {% endfor %}
+    {% endif %}
 {% endif %}

components/tools/OmeroWeb/omeroweb/webclient/templates/webclient/data/container_tags_containers.html

@@ -26,18 +26,18 @@
     {% if manager.c_size > 0 %}
 
     {% for i in manager.containers.images %}
-        <li id='image-{{ i.id }}' rel="image{% if not i.canEdit %}-locked{% endif %}" class="{{ i.getPermsCss }}">
+        <li id='image-{{ i.id }}' rel="image{% if not i.isOwned %}-locked{% endif %}" class="{{ i.getPermsCss }}">
             <a href="#">{{ i.name|truncatebefor:"30" }}</a>
         </li>
     {% endfor %}
 
     {% for c in manager.containers.projects %}
-    <li id='project-{{ c.id }}' rel="project{% if not c.canEdit %}-locked{% endif %}" class="{{ c.getPermsCss }}">
+    <li id='project-{{ c.id }}' rel="project{% if not c.isOwned %}-locked{% endif %}" class="{{ c.getPermsCss }}">
         <a href="#">{{ c.name|truncatebefor:"35" }}</a>
         <ul>
             {% if c.countChildren %}
             {% for d in c.listChildren %}
-                <li id='dataset-{{ d.id }}' rel="dataset{% if not d.canEdit %}-locked{% endif %}" class="{{ c.getPermsCss }}{% if d.countChildren %} jstree-closed{% endif %}">
+                <li id='dataset-{{ d.id }}' rel="dataset{% if not d.isOwned %}-locked{% endif %}" class="{{ c.getPermsCss }}{% if d.countChildren %} jstree-closed{% endif %}">
                     <a href="#">{{ d.name|truncatebefor:"35" }}</a>
                 </li>
             {% endfor %}
@@ -47,18 +47,18 @@
     {% endfor %}
 
     {% for d in manager.containers.datasets %}
-        <li id='dataset-{{ d.id }}' rel="dataset{% if not d.canEdit %}-locked{% endif %}" class="{{ c.getPermsCss }}{% if d.countChildren %} jstree-closed{% endif %}">
+        <li id='dataset-{{ d.id }}' rel="dataset{% if not d.isOwned %}-locked{% endif %}" class="{{ c.getPermsCss }}{% if d.countChildren %} jstree-closed{% endif %}">
             <a href="#">{{ d.name|truncatebefor:"35" }}</a>
         </li>
     {% endfor %}
 
     {% for c in manager.containers.screens %}
-    <li id='screen-{{ c.id }}' rel="screen{% if not c.canEdit %}-locked{% endif %}" class="{{ c.getPermsCss }}">
+    <li id='screen-{{ c.id }}' rel="screen{% if not c.isOwned %}-locked{% endif %}" class="{{ c.getPermsCss }}">
         <a href="#">{{ c.name|truncatebefor:"35" }}</a>
         <ul>
             {% if c.countChildren %}
             {% for d in c.listChildren %}
-                <li id='plate-{{ d.id }}' rel="plate{% if not d.canEdit %}-locked{% endif %}" class="{{ d.getPermsCss }}">
+                <li id='plate-{{ d.id }}' rel="plate{% if not d.isOwned %}-locked{% endif %}" class="{{ d.getPermsCss }}">
                     <a href="#">{{ d.name|truncatebefor:"35" }}</a>
                 </li>
             {% endfor %}
@@ -68,12 +68,12 @@
     {% endfor %}
 
     {% for d in manager.containers.plates %}
-        <li id='plate-{{ d.id }}' rel="plate{% if not d.canEdit %}-locked{% endif %}" class="{{ d.getPermsCss }}">
+        <li id='plate-{{ d.id }}' rel="plate{% if not d.isOwned %}-locked{% endif %}" class="{{ d.getPermsCss }}">
             <a href="#">{{ d.name|truncatebefor:"35" }}</a>
             {% if d.countPlateAcquisitions %}
             <ul>
                 {% for e in d.listPlateAcquisitions %}
-                    <li id='acquisition-{{ e.id }}' rel="acquisition{% if not e.canEdit %}-locked{% endif %}" class="{{ e.getPermsCss }}">
+                    <li id='acquisition-{{ e.id }}' rel="acquisition{% if not e.isOwned %}-locked{% endif %}" class="{{ e.getPermsCss }}">
                         <a href="#">{{ e.name|truncatebefor:"35" }}</a>
                     </li>
                 {% endfor %}
@@ -83,7 +83,7 @@
     {% endfor %}
 
     {% for a in manager.containers.aquisitions %}
-        <li id='acquisition-{{ a.id }}' rel="acquisition{% if not a.canEdit %}-locked{% endif %}" class="{{ a.getPermsCss }}">
+        <li id='acquisition-{{ a.id }}' rel="acquisition{% if not a.isOwned %}-locked{% endif %}" class="{{ a.getPermsCss }}">
             <a href="#">{{ a.name|truncatebefor:"35" }}</a>
         </li>
     {% endfor %}

components/tools/OmeroWeb/omeroweb/webclient/templates/webclient/data/container_tags_subtree.html

@@ -24,7 +24,7 @@
 
 {% if manager.containers.images %}
 {% for d in manager.containers.images %}
-    <li id='image-{{ d.id }}' rel="image{% if not d.canEdit %}-locked{% endif %}" class="{{ d.getPermsCss }}">
+    <li id='image-{{ d.id }}' rel="image{% if not d.isOwned %}-locked{% endif %}" class="{{ d.getPermsCss }}">
         <a href="#">{{ d.name|truncatebefor:"30" }}</a>
     </li>
 {% endfor %}

components/tools/OmeroWeb/omeroweb/webclient/templates/webclient/data/container_tags_tree.html

@@ -22,22 +22,22 @@
 {% endcomment %}
 
 <ul>
-    <li id="experimenter-0" rel="experimenter"><a href="#">{% if manager.experimenter %}{{ manager.experimenter.getFullName }}{% else %}{{ ome.user.getFullName }}{% endif %}</a>
+    <li id="experimenter-0" rel="experimenter"><a href="#">{% if manager.experimenter %}{{ manager.experimenter.getFullName }}{% else %}All Members{% endif %}</a>
         {% if manager.t_size %}
         <ul>
             {% for t in manager.tags %}
             {% if t.ns %}
-            <li id='tagset-{{ t.id }}' rel="tagset{% if not t.canEdit %}-locked{% endif %}" {% if t.countTagsInTagset %}class="jstree-closed"{% endif %}><a href="#">{{ t.textValue|truncatebefor:"35" }}</a>
+            <li id='tagset-{{ t.id }}' rel="tagset{% if not t.isOwned %}-locked{% endif %}" {% if t.countTagsInTagset %}class="jstree-closed"{% endif %}><a href="#">{{ t.textValue|truncatebefor:"35" }}</a>
                 {% if t.countTagsInTagset %}
                 <ul>    
                     {% for d in t.listTagsInTagset %}
-                        <li id='tag-{{ d.id }}' rel="tag{% if not d.canEdit %}-locked{% endif %}" class="jstree-closed"><a href="#">{{ d.textValue|truncatebefor:"35" }}</a></li>
+                        <li id='tag-{{ d.id }}' rel="tag{% if not d.isOwned %}-locked{% endif %}" class="jstree-closed"><a href="#">{{ d.textValue|truncatebefor:"35" }}</a></li>
                     {% endfor %}
                 </ul>
                 {% endif %}
             </li>
             {% else %}
-            <li id='tag-{{ t.id }}' rel="tag{% if not t.canEdit %}-locked{% endif %}" class="jstree-closed"><a href="#">{{ t.textValue|truncatebefor:"35" }}</a></li>
+            <li id='tag-{{ t.id }}' rel="tag{% if not t.isOwned %}-locked{% endif %}" class="jstree-closed"><a href="#">{{ t.textValue|truncatebefor:"35" }}</a></li>
             {% endif %}
             {% endfor %}            
         </ul>