Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
- Loading branch information
Showing
3 changed files
with
31 additions
and
0 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,29 @@ | ||
#!/bin/bash | ||
|
||
# Set up the data structure needed for the tests | ||
# (see setup.csv) | ||
|
||
cd $OMERO_HOME/bin | ||
|
||
./omero login root@localhost -w omero | ||
./omero obj new Dataset name=TestDataset | ||
./omero obj new Project name=TestProject | ||
./omero obj new ProjectDatasetLink parent=Project:1 child=Dataset:1 | ||
touch "8bit-unsigned&pixelType=uint8&sizeZ=3&sizeC=5&sizeT=7&sizeX=512&sizeY=512.fake" | ||
./omero import "8bit-unsigned&pixelType=uint8&sizeZ=3&sizeC=5&sizeT=7&sizeX=512&sizeY=512.fake" -T Dataset:id:1 | ||
|
||
./omero obj new CommentAnnotation textValue=BlaBla | ||
./omero obj new ImageAnnotationLink parent=Image:1 child=CommentAnnotation:1 | ||
touch test.csv | ||
./omero upload test.csv | ||
./omero obj new FileAnnotation file=OriginalFile:47 | ||
./omero obj new ImageAnnotationLink parent=Image:1 child=FileAnnotation:2 | ||
|
||
./omero obj new Screen name=TestScreen | ||
touch "SPW&plates=1&plateRows=8&plateCols=8&fields=4&plateAcqs=1.fake" | ||
./omero import "SPW&plates=1&plateRows=8&plateCols=8&fields=4&plateAcqs=1.fake" -T Screen:id:1 | ||
|
||
./omero obj new MapAnnotation | ||
./omero obj map-set MapAnnotation:3 mapValue testkey testvalue | ||
./omero obj new ScreenAnnotationLink parent=Screen:1 child=MapAnnotation:3 | ||
|
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -1,4 +1,5 @@ | ||
#!/usr/bin/env bash | ||
|
||
cat <<EOF | R --no-save | ||
library(devtools) | ||
library(romero.gateway) | ||
|