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[pre-commit.ci] pre-commit autoupdate #170

[pre-commit.ci] pre-commit autoupdate

[pre-commit.ci] pre-commit autoupdate #170

Workflow file for this run

# The purpose of this action is to calculate the code coverage and add the results on codecov.io
# codecov.io provides a badge showing the current coverage and generates coverage reports for each pull requests.
#
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]
name: test-coverage
jobs:
test-coverage:
runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v2
- uses: r-lib/actions/setup-r@v2
with:
use-public-rspm: true
- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::covr
needs: coverage
- name: Manually install preprocessCore
if: ${{ !(matrix.config.os == 'windows-latest' || matrix.config.os == 'macOS-latest') }}
run: |
git clone https://github.com/bmbolstad/preprocessCore.git
cd preprocessCore
R CMD INSTALL --configure-args="--disable-threading" .
- name: Test coverage
run: covr::codecov(quiet = FALSE)
shell: Rscript {0}