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make batches smaller and timeouts longer in Core #145

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Dec 9, 2021
Merged

make batches smaller and timeouts longer in Core #145

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4 changes: 2 additions & 2 deletions AnnotatorCore.py
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Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,7 @@
log = logging.getLogger('AnnotatorCore')

# API timeout is set to two minutes
REQUEST_TIMEOUT = 120
REQUEST_TIMEOUT = 256

csv.field_size_limit(int(ct.c_ulong(-1).value // 2)) # Deal with overflow problem on Windows, https://stackoverflow.co/120m/questions/15063936/csv-error-field-larger-than-field-limit-131072
sizeLimit = csv.field_size_limit()
Expand Down Expand Up @@ -160,7 +160,7 @@ class ReferenceGenome(Enum):
QueryType.GENOMIC_CHANGE: GENOMIC_CHANGE_HEADERS
}

POST_QUERIES_THRESHOLD = 1000
POST_QUERIES_THRESHOLD = 256
POST_QUERIES_THRESHOLD_GC_HGVSG = 100

def getOncokbInfo():
Expand Down