Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Support individual CNA file format #162

Merged
merged 1 commit into from May 25, 2022

Conversation

zhx828
Copy link
Member

@zhx828 zhx828 commented Apr 7, 2022

This following format will be supported. This fixes #123

Tumor_Sample_Barcode Hugo_Symbol Copy_Number_Alteration
TCGA-05-4417-01 MET 2
TCGA-05-4417-01 ERBB2 Amplification

@zhx828 zhx828 added the fix Fix tag for release label Apr 7, 2022
@zhx828 zhx828 requested a review from jjgao April 7, 2022 01:40
@zhx828
Copy link
Member Author

zhx828 commented Apr 7, 2022

Copy link
Member

@jjgao jjgao left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

LGTM.

The following format will be supported

| Tumor_Sample_Barcode | Hugo_Symbol | Copy_Number_Alteration |
|----------------------|-------------|------------------------|
| TCGA-05-4417-01      | MET         | 2                      |
| TCGA-05-4417-01      | ERBB2       | 2                      |
@zhx828 zhx828 merged commit f4535bf into oncokb:next-minor-release May 25, 2022
@zhx828 zhx828 deleted the support-long-cna branch May 25, 2022 19:28
@zhx828 zhx828 mentioned this pull request Jun 6, 2022
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
fix Fix tag for release
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

2 participants