Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
A way to succinctly specify certain resolution patterns for zoomification on the command line.
B
: binary geometric progression: zooms increase by factors of 2.N
: preferred/nice progression similar to https://en.wikipedia.org/wiki/Preferred_number#1-2-5_series but based on steps of factor 10 interleaved with steps of 2 and 5.Progressions increase until reaching a resolution of genome length in bp / 256.
Examples:
1000N
expands to the 1-2-5 series:[1000, 2000, 5000, 10000, 20000, ...]
5000N
expands to the 10-25-50 series:[5000, 10000, 25000, 50000, 100000, ...]
1000,2000,5000N
which expands to[1000, 2000, 5000, 10000, 25000, 50000, 100000, 250000, ...]