Pre-process example notebooks #510
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name: Pre-process example notebooks | |
on: | |
workflow_dispatch: | |
inputs: | |
pr_number: | |
description: 'Update the cache for PR#: (leave blank if not a PR)' | |
required: false | |
default: "" | |
type: string | |
schedule: | |
- cron: 0 0 * * * # 1/day at midnight UTC | |
push: | |
branches: | |
- main | |
concurrency: | |
group: ${{ github.workflow }}-${{ inputs.pr_number || github.ref || github.run_id }} | |
cancel-in-progress: true | |
jobs: | |
preprocess: | |
runs-on: ubuntu-latest | |
steps: | |
- name: Choose deployment branch | |
shell: bash -l {0} | |
run: | | |
if [[ ${{ github.event_name }} != "workflow_dispatch" ]]; then | |
echo "DEPLOY_BRANCH=_cookbook_data_$GITHUB_REF_NAME" >> "$GITHUB_ENV" | |
elif [[ "${{ inputs.pr_number }}" == "" ]]; then | |
echo "DEPLOY_BRANCH=_cookbook_data_$GITHUB_REF_NAME" >> "$GITHUB_ENV" | |
else | |
echo "DEPLOY_BRANCH=_cookbook_data_PR${{ inputs.pr_number }}" >> "$GITHUB_ENV" | |
fi | |
- name: Report dispatch to PR | |
if: github.event_name == 'workflow_dispatch' && inputs.pr_number != '' | |
uses: thollander/actions-comment-pull-request@v2 | |
with: | |
pr_number: ${{ inputs.pr_number }} | |
message: > | |
A workflow has been dispatched to regenerate the cookbook cache for this PR. | |
- Run ID: [${{ github.run_id }}] | |
- Triggering actor: ${{ github.triggering_actor }} | |
- Target branch: ${{ github.ref_name }} | |
- Deployment branch: ${{ env.DEPLOY_BRANCH }} | |
[${{ github.run_id }}]: ${{ github.server_url }}/${{ github.repository }}/actions/runs/${{ github.run_id }} | |
- name: Create check | |
if: github.event_name == 'workflow_dispatch' && inputs.pr_number != '' | |
id: create-check | |
uses: actions/github-script@v6 | |
with: | |
script: | | |
const created_run = await github.request( | |
'POST /repos/{owner}/{repo}/check-runs', | |
{ | |
owner: context.repo.owner, | |
repo: context.repo.repo, | |
name: '${{ github.job }}', | |
head_sha: '${{ github.sha }}', | |
details_url: '${{ github.server_url }}/${{ github.repository }}/actions/runs/${{ github.run_id }}', | |
status: 'in_progress', | |
started_at: new Date().toISOString(), | |
output: { | |
title: 'Regenerate example notebook cache', | |
summary: 'Results and progress: ${{ github.server_url }}/${{ github.repository }}/actions/runs/${{ github.run_id }}', | |
text: '' | |
}, | |
headers: { | |
'X-GitHub-Api-Version': '2022-11-28' | |
} | |
} | |
) | |
return created_run.data.id | |
- uses: actions/checkout@v3 | |
- name: Install Conda environment | |
uses: mamba-org/setup-micromamba@v1 | |
with: | |
environment-file: devtools/conda-envs/examples_env.yml | |
- name: Pre-process and execute notebooks | |
shell: bash -l {0} | |
run: | | |
set -e | |
python source/_ext/proc_examples.py --prefix=deploy/ --cache-branch=${DEPLOY_BRANCH} --log-failures=notebooks_log.json | |
- name: Read notebooks log | |
if: always() | |
shell: bash -l {0} | |
run: echo "NOTEBOOKS_LOG=$(cat 'notebooks_log.json')" >> "$GITHUB_ENV" | |
- name: Deploy cache | |
shell: bash -l {0} | |
run: | | |
cd deploy | |
git config --global user.name github-actions | |
git config --global user.email github-actions@github.com | |
git config --global init.defaultBranch main | |
# Create an empty repository so we don't have to fetch (guaranteeing atomicity) | |
git init . | |
git remote add origin "https://github-actions:${{ github.token }}@github.com/${{ github.repository }}.git" | |
# Commit the deployment and force push to the deploy branch | |
git add . | |
git commit -m "Deploy pre-processed notebook cache" | |
git push --force origin HEAD:$DEPLOY_BRANCH | |
- name: Trigger RTD build | |
# RTD doesn't offer a way to manually trigger builds in PRs, so we'll just do this for other builds | |
if: github.event_name == 'schedule' || github.event_name == 'push' || (github.event_name == 'workflow_dispatch' && inputs.pr_number == '') | |
shell: bash -l {0} | |
run: | | |
curl -X POST -d "branches=$GITHUB_REF_NAME" -d "token=${{ secrets.RTD_WEBHOOK_TOKEN }}" https://readthedocs.org/api/v2/webhook/openff-docs/243876/ | |
- name: Report status to PR | |
id: reportStatusToPr | |
if: always() && github.event_name == 'workflow_dispatch' && inputs.pr_number != '' | |
uses: thollander/actions-comment-pull-request@v2 | |
with: | |
pr_number: ${{ inputs.pr_number }} | |
message: > | |
A workflow dispatched to regenerate the cookbook cache for this PR has just finished. | |
- Run ID: [${{ github.run_id }}] | |
- Triggering actor: ${{ github.triggering_actor }} | |
- Target branch: ${{ github.ref_name }} | |
- Deployment branch: ${{ env.DEPLOY_BRANCH }} | |
- Job status: **${{ job.status }}** | |
- Notebooks status: ${{fromJSON(env.NOTEBOOKS_LOG).n_successful}} / ${{fromJSON(env.NOTEBOOKS_LOG).n_total}} notebooks successfully executed (${{fromJSON(env.NOTEBOOKS_LOG).n_ignored}} failures ignored) | |
${{(fromJSON(env.NOTEBOOKS_LOG).failed || fromJSON(env.NOTEBOOKS_LOG).ignored) && '- Failing notebooks: | |
- ' || ''}}${{join(fromJSON(env.NOTEBOOKS_LOG).failed, ' | |
- ')}}${{fromJSON(env.NOTEBOOKS_LOG).ignored && ' | |
- [ignored] ' || ''}}${{join(fromJSON(env.NOTEBOOKS_LOG).ignored, ' | |
- [ignored] ')}} | |
Changes will only be visible in the ReadTheDocs | |
preview after it has been [rebuilt]. | |
[${{ github.run_id }}]: ${{ github.server_url }}/${{ github.repository }}/actions/runs/${{ github.run_id }} | |
[rebuilt]: https://readthedocs.org/projects/openff-docs/builds/ | |
- name: Report status to PR on templating failure | |
if: always() && steps.reportStatusToPr.outcome == 'failure' | |
uses: thollander/actions-comment-pull-request@v2 | |
with: | |
pr_number: ${{ inputs.pr_number }} | |
message: > | |
A workflow dispatched to regenerate the cookbook cache for this PR has just finished. | |
- Run ID: [${{ github.run_id }}] | |
- Triggering actor: ${{ github.triggering_actor }} | |
- Target branch: ${{ github.ref_name }} | |
- Deployment branch: ${{ env.DEPLOY_BRANCH }} | |
- Job status: **${{ job.status }}** | |
- Notebooks status: N/A | |
Changes will only be visible in the ReadTheDocs | |
preview after it has been [rebuilt]. | |
[${{ github.run_id }}]: ${{ github.server_url }}/${{ github.repository }}/actions/runs/${{ github.run_id }} | |
[rebuilt]: https://readthedocs.org/projects/openff-docs/builds/ | |
- name: Update check | |
if: always() && github.event_name == 'workflow_dispatch' && inputs.pr_number != '' | |
uses: actions/github-script@v6 | |
with: | |
script: | | |
await github.request( | |
'PATCH /repos/{owner}/{repo}/check-runs/{check_run_id}', | |
{ | |
owner: context.repo.owner, | |
repo: context.repo.repo, | |
check_run_id: ${{ steps.create-check.outputs.result }}, | |
status: 'completed', | |
conclusion: '${{ job.status }}', | |
completed_at: new Date().toISOString(), | |
headers: { | |
'X-GitHub-Api-Version': '2022-11-28' | |
} | |
} | |
) |