@openmicroscopy

Open Microscopy Environment

Software and data format standards for management of microscopy image data. Joint project between international private and public research

Pinned repositories

  1. bioformats

    Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment (particularly UW-Madison LOCI and Glencoe Software…

    Java 113 138

  2. openmicroscopy

    OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological light microscopy data. A joint project between universities,…

    Java 91 77

  3. ome-documentation

    Sphinx-based documentation for the Open Microscopy Environment

    Shell 14 36

  4. infrastructure

    A repository containing scripts for managing infrastructure

    Python 4 10

  • Test repository for the snoopycrimecop/snoopycrimecop code.

    10 Updated Jan 21, 2017
  • Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment (particularly UW-Madison LOCI and Glencoe Software). Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.

    Java 113 138 Updated Jan 20, 2017
  • OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological light microscopy data. A joint project between universities, research establishments and industry in Europe and the USA, OME has over 20 active researchers with strong links to the microscopy community. Funded …

    Java 91 77 Updated Jan 20, 2017
  • Scripts for OME releases.

    HTML 13 Updated Jan 20, 2017
  • Sphinx-based documentation for the Open Microscopy Environment

    Shell 14 36 Updated Jan 20, 2017
  • OME tools for managing the Git(Hub) workflow

    Python 11 Updated Jan 20, 2017
  • A repository for performance testing

    CMake 2 Updated Jan 19, 2017
  • Shell 2 8 Updated Jan 19, 2017
  • A repository containing scripts for managing infrastructure

    Python 4 10 Updated Jan 19, 2017
  • Run Awstats in Docker

    Perl 2 Updated Jan 19, 2017
  • An OMERO.web app for generating Web errors

    Python 5 Updated Jan 19, 2017
  • An OMERO.web app for prototypes and examples

    HTML 1 6 Updated Jan 19, 2017
  • Examples showing how to consume Bio-Formats with Maven or Gradle

    3 Updated Jan 18, 2017
  • Ansible Role - Munin

    Shell 15 Updated Jan 18, 2017
  • 1 Updated Jan 18, 2017
  • Jenkins slave container based on omero-ssh-systemd

    Shell 4 Updated Jan 18, 2017
  • Ansible role for a rsync server

    Python 1 Updated Jan 17, 2017
  • Python 1 Updated Jan 17, 2017
  • Python 1 Updated Jan 17, 2017
  • Install Java JREs and optionally JDKs.

    Python 1 Updated Jan 17, 2017
  • OMERO marshalling infrastructure

    Python 2 7 Updated Jan 17, 2017
  • Multi-container OMERO

    Shell 2 Updated Jan 14, 2017
  • Updated Jan 12, 2017
  • Updated Jan 12, 2017
  • Updated Jan 12, 2017
  • 1 Updated Jan 12, 2017
  • 1 Updated Jan 12, 2017
  • Updated Jan 12, 2017
  • Updated Jan 12, 2017
  • 1 Updated Jan 12, 2017