Skip to content
@openvar

openvar

Pinned Loading

  1. variantValidator variantValidator Public

    Public repository for VariantValidator project

    Python 67 21

  2. variantFormatter variantFormatter Public

    Python 4 4

  3. rest_variantValidator rest_variantValidator Public

    REST Interface for VariantValidator. Includes docker container

    Python 9 37

  4. VVweb VVweb Public

    HTML 1

  5. vv_hgvs vv_hgvs Public

    Forked from biocommons/hgvs

    Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`

    Python 6 4

  6. populate_vvdb populate_vvdb Public

    Code used to populate the validator database used by VV

    Python

Repositories

Showing 10 of 12 repositories
  • vv_hgvs Public Forked from biocommons/hgvs

    Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`

    openvar/vv_hgvs’s past year of commit activity
    Python 6 Apache-2.0 94 6 2 Updated Jun 25, 2024
  • rest_variantValidator Public

    REST Interface for VariantValidator. Includes docker container

    openvar/rest_variantValidator’s past year of commit activity
    Python 9 AGPL-3.0 37 18 9 Updated Jun 12, 2024
  • variantValidator Public

    Public repository for VariantValidator project

    openvar/variantValidator’s past year of commit activity
    Python 67 AGPL-3.0 21 86 1 Updated Jun 12, 2024
  • VVweb Public
    openvar/VVweb’s past year of commit activity
    HTML 1 AGPL-3.0 0 16 6 Updated May 21, 2024
  • NextFlow_RD_Genomic_QR Public Forked from Peter-J-Freeman/NextFlow_RD_Genomic

    NextFlow pipeline with BQSR and VQSR applied

    openvar/NextFlow_RD_Genomic_QR’s past year of commit activity
    Nextflow 1 12 0 0 Updated May 10, 2024
  • variantFormatter Public
    openvar/variantFormatter’s past year of commit activity
    Python 4 AGPL-3.0 4 3 0 Updated Apr 22, 2024
  • populate_vvdb Public

    Code used to populate the validator database used by VV

    openvar/populate_vvdb’s past year of commit activity
    Python 0 0 0 0 Updated Apr 16, 2024
  • NextFlow_RD_Genomic_VQR Public

    NextFlow pipeline with BQSR and VQSR applied

    openvar/NextFlow_RD_Genomic_VQR’s past year of commit activity
    Nextflow 1 0 0 0 Updated Apr 9, 2024
  • variantAnnotator Public

    Building an interactive app that validates a variant description in the HGVS format and adds relevant annotations from different resources based on user requests

    openvar/variantAnnotator’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Apr 26, 2023
  • VV_databases Public

    Database dumps for VariantValidator

    openvar/VV_databases’s past year of commit activity
    HTML 0 GPL-3.0 0 4 0 Updated Nov 22, 2021
View all repositories

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Top languages

Loading…

Most used topics

Loading…