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switch to use the reader from tifffile directly #289

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Apr 18, 2023
Merged

switch to use the reader from tifffile directly #289

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5 changes: 4 additions & 1 deletion src/imars3d/backend/dataio/data.py
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Original file line number Diff line number Diff line change
Expand Up @@ -254,7 +254,10 @@ def _load_images(filelist: List[str], desc: str, max_workers: int, tqdm_class) -
# figure out the file type and select corresponding reader from dxchange
file_ext = Path(filelist[0]).suffix.lower()
if file_ext in (".tif", ".tiff"):
reader = dxchange.read_tiff
# reader = dxchange.read_tiff
# NOTE: switch to tifffile until we figure out what is causing dxchange
# to slow down the loading speed.
reader = tifffile.imread
elif file_ext == ".fits":
reader = dxchange.read_fits
else:
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