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Add Soft-DTW cost function #318

Merged
merged 15 commits into from
Feb 27, 2023
Merged

Add Soft-DTW cost function #318

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eeefd5e
Add initial `SoftDTW` cost matrix
michalk8 Feb 22, 2023
aa17590
Add tree flatten
michalk8 Feb 22, 2023
1103c6c
Fix typo
michalk8 Feb 22, 2023
edb3bb7
Add custom vjps
michalk8 Feb 22, 2023
fbe671d
Add debiased `SoftDTW`
michalk8 Feb 22, 2023
017ecb4
Update pre-commits
michalk8 Feb 23, 2023
1b6233a
Merge branch 'main' into feature/soft-dtw-cost
michalk8 Feb 24, 2023
cd3a63e
Add citations
michalk8 Feb 24, 2023
512c592
Format references
michalk8 Feb 24, 2023
65c95c1
Add tests
michalk8 Feb 24, 2023
cbcf142
Add `axis` to `softmin`, add docstring
michalk8 Feb 24, 2023
13fba32
Update docstring
michalk8 Feb 24, 2023
56f0763
Unpack
michalk8 Feb 24, 2023
586fa14
Skip `tslearn` on `Python3.11`
michalk8 Feb 27, 2023
84e218b
Revert test requirements specification
michalk8 Feb 27, 2023
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6 changes: 3 additions & 3 deletions .pre-commit-config.yaml
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Expand Up @@ -12,14 +12,14 @@ repos:
- id: yapf
additional_dependencies: [toml]
- repo: https://github.com/nbQA-dev/nbQA
rev: 1.6.1
rev: 1.6.3
hooks:
- id: nbqa-pyupgrade
args: [--py38-plus]
- id: nbqa-black
- id: nbqa-isort
- repo: https://github.com/macisamuele/language-formatters-pre-commit-hooks
rev: v2.6.0
rev: v2.7.0
hooks:
- id: pretty-format-yaml
args: [--autofix, --indent, '2']
Expand All @@ -36,7 +36,7 @@ repos:
- id: check-case-conflict
- repo: https://github.com/charliermarsh/ruff-pre-commit
# Ruff version.
rev: v0.0.246
rev: v0.0.252
hooks:
- id: ruff
args: [--fix, --exit-non-zero-on-fix]
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1 change: 1 addition & 0 deletions docs/geometry.rst
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Expand Up @@ -64,6 +64,7 @@ Cost Functions
costs.ElasticL1
costs.ElasticSTVS
costs.ElasticSqKOverlap
costs.SoftDTW

Utilities
---------
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