######### odgi matrix #########
Write the graph topology in sparse matrix format.
odgi matrix [-i, --idx=FILE] [OPTION]…
The odgi matrix command generates a sparse matrix format out of the graph topology of a given variation graph.
MANDATORY OPTIONS --------------
-i, --idx=FILE
Load the succinct variation graph in ODGI format from this FILE. The file name usually ends with .og. It also accepts GFAv1, but the on-the-fly conversion to the ODGI format requires additional time!
Load the succinct variation graph in ODGI format from this FILE. The file name usually ends with .og. It also accepts GFAv1, but the on-the-fly conversion to the ODGI format requires additional time!
-e, --edge-depth-weight
Weigh edges by their path depth.
Weigh edges by their path depth.
-d, --delta-weight
Weigh edges by their inverse id delta.
Weigh edges by their inverse id delta.
-t, --threads=N
Number of threads to use for parallel operations.
Number of threads to use for parallel operations.
-P, --progress
Print information about the operations and the progress to stderr.
Print information about the operations and the progress to stderr.
-h, --help
Print a help message for odgi matrix.
Print a help message for odgi matrix.