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38 Open 94 Closed
38 Open 94 Closed
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Issues list

Remove Complex Region of the Graph Pangenome
#572 opened May 7, 2024 by zhangyixing3
2
exporting all possible closed circular path in fasta from a gfa file
#563 opened Mar 13, 2024 by splaisan
1
bed file
#561 opened Feb 28, 2024 by ZiliaMR
3
bring odgi to macos-aarch64 help wanted Extra attention is needed
#553 opened Feb 6, 2024 by subwaystation
Trailing comma on P lines after pruning with odgi prune
#549 opened Jan 18, 2024 by sivico26
5
Sorting graph with -Y option triggers "Assertion `idx < this->size()' failed" error
#548 opened Jan 16, 2024 by sivico26
12
unable to untangle injected graph
#543 opened Jan 4, 2024 by michael-olufemi
3
Failing to inject path into og file while using odgi -inject
#536 opened Oct 26, 2023 by gavinieong
1
Translating path coordinates to flattened pangenome coordinates
#533 opened Sep 28, 2023 by gputzel
1
Defining reference path on graph
#532 opened Sep 28, 2023 by ManuelTgn
3
order of species in odgi viz
#530 opened Sep 18, 2023 by isabelladistefano
1
Does the "odgi sort " truncate the path?
#529 opened Sep 15, 2023 by hui-liu
1
odgi extract - please remove nodes that are not in specified BED range(s)
#526 opened Aug 24, 2023 by subwaystation
9
building odgi with Cactus downloadPangenomeTools results in c++: fatal error: Killed signal terminated program cc1plus
#521 opened Jul 24, 2023 by SomePersonSomeWhereInTheWorld
8
Extending existing graph with long reads
#518 opened Jul 12, 2023 by BaxW
2
odgi extract error
#516 opened Jul 3, 2023 by GeorgeBGM
23
Extending a region with edges!
#515 opened Jun 23, 2023 by coevolutionlab
2
Extracting paths corresponding to a list of nodes
#511 opened Jun 19, 2023 by sdws1983
Is odgi overlap optimized for reciprocal overlaps? enhancement New feature or request
#502 opened May 22, 2023 by cgroza
2
Visualise specific positions of a chromsome
#499 opened Apr 19, 2023 by hzlnutspread
9
is there a way to extract from a graph with uncompacted node IDs?
#497 opened Apr 18, 2023 by esrice
Overeager link-adding in odgi flip
#496 opened Apr 18, 2023 by anshumanmohan
2
Strange behavior in odgi build
#495 opened Apr 15, 2023 by anshumanmohan
7
Race condition in ".pathnames.iv" file in position command
#493 opened Apr 12, 2023 by ASLeonard
12
atomicbitvector assertion error in untangle
#489 opened Mar 29, 2023 by esrice
2
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