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  1. helpful_commands helpful_commands Public

    Command-line tools, commands, and code snippets for performing routine data processing and bioinformatics tasks.

    36 14

  2. helpful_links helpful_links Public

    Links to resources related to bioinformatics and data analysis.

    21 6

  3. cgview cgview Public

    CGView is a Java package for generating high-quality, zoomable maps of circular genomes.

    Java 38 16

  4. cgview_comparison_tool cgview_comparison_tool Public

    The CGView Comparison Tool (CCT) is a package for visually comparing bacterial, plasmid, chloroplast, and mitochondrial sequences.

    Perl 29 18

  5. sequence_manipulation_suite sequence_manipulation_suite Public

    A collection of simple JavaScript programs for generating, formatting, and analyzing short DNA and protein sequences. The Sequence Manipulation Suite is commonly used by molecular biologists, for t…

    59 23

  6. ncbi_search ncbi_search Public

    This script uses NCBI's Entrez Programming Utilities to perform searches of NCBI databases. This script can return either the complete database records, or the IDs of the records.

    Perl 7 4