chore: Update existing examples

[jiriminarcik]

Description

Updated the following examples and added them to registry:

• logic-gates (see feat: More domain examples #635)
• molecules (see feat: More domain examples #635)
• full-moon (see feat: L-system example  #872)

Checklist

• I have commented my code, particularly in hard-to-understand areas
• My changes generate no new ESLint warnings
• I have reviewed any generated registry diagram changes

[github-actions]

± Registry diff

A	full-moon-full-moon.svg
A	glutamine-molecules-basic.svg
A	half-adder-distinctive-shape.svg

📊 Performance

Key

Note that each bar component rounds up to the nearest 100ms, so each full bar is an overestimate by up to 400ms.

     0s   1s   2s   3s   4s   5s   6s   7s   8s   9s
     |    |    |    |    |    |    |    |    |    |
name ▝▀▀▀▀▀▀▀▀▀▀▀▚▄▄▄▄▄▄▄▄▄▞▀▀▀▀▀▀▀▀▀▀▀▀▚▄▄▄▄▄▄▄▄▄▖
      compilation labelling optimization rendering

Data

                                        0s   1s   2s   3s   4s   5s   6s   7s   8s
                                        |    |    |    |    |    |    |    |    |
3d-projection-fake-3d-linear-algebra    ▝▀▚▚
allShapes-allShapes                     ▝▀▀▞▄▖
arrowheads-arrowheads                   ▝▀▞▖
caffeine-structural-formula             ▝▀▀▀▀▀▀▀▀▀▀▀▞▚
center-shrink-circle-animation          ▝▞▖
circle-example-euclidean                ▝▀▀▀▀▀▞▀▀▖
collinear-euclidean                     ▝▀▀▀▚▚
congruent-triangles-euclidean           ▝▀▀▀▀▀▀▀▀▀▀▞▖
continuousmap-continuousmap             ▝▀▚▚
full-moon-full-moon                     ▝▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▚▀▀▚
glutamine-molecules-basic               ▝▀▀▀▀▚▚
half-adder-distinctive-shape            ▝▀▀▀▚▚
hypergraph-hypergraph                   ▝▀▀▀▀▀▀▀▀▀▀▀▀▚▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▚
incenter-triangle-euclidean             ▝▀▀▀▀▀▞▖
lagrange-bases-lagrange-bases           ▝▀▚▚
midsegment-triangles-euclidean          ▝▀▀▀▀▞▖
non-convex-non-convex                   ▝▀▀▀▀▞▖
one-water-molecule-atoms-and-bonds      ▝▚▚
parallel-lines-euclidean                ▝▀▀▀▀▚▚
persistent-homology-persistent-homology ▝▀▀▀▀▀▀▚▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▄
points-around-line-shape-distance       ▝▀▀▀▀▚▚
points-around-polyline-shape-distance   ▝▀▀▀▀▀▀▀▀▀▀▀▀▞▖
points-around-star-shape-distance       ▝▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▞▖
siggraph-teaser-euclidean-teaser        ▝▀▀▀▀▀▀▚▚
small-graph-disjoint-rect-line-horiz    ▝▀▀▀▀▀▀▀▀▀▀▚▚
small-graph-disjoint-rects              ▝▀▞▖
small-graph-disjoint-rects-large-canvas ▝▀▞▖
small-graph-disjoint-rects-small-canvas ▝▀▚▚
tree-tree                               ▝▀▚▚
tree-venn                               ▝▀▀▀▀▞▖
tree-venn-3d                            ▝▀▀▀▚▚▄
two-vectors-perp-vectors-dashed         ▝▀▚▚
vector-wedge-exterior-algebra           ▝▀▀▞▖
wet-floor-atoms-and-bonds               ▝▀▀▀▞▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▚
word-cloud-example-word-cloud           ▝▀▀▀▀▀▚▚
wos-laplace-estimator-walk-on-spheres   ▝▀▀▀▀▀▀▀▀▚▚
wos-nested-estimator-walk-on-spheres    ▝▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▀▞▀▀▀▀▀▀▚
wos-offcenter-estimator-walk-on-spheres ▝▀▀▀▀▀▀▀▀▀▀▞▀▀▀▖
wos-poisson-estimator-walk-on-spheres   ▝▀▀▀▀▀▀▀▀▀▀▀▞▀▖

[cloudflare-pages]

Deploying with    Cloudflare Pages

Latest commit:	e9bbd29
Status:	✅  Deploy successful!
Preview URL:	https://72e1d254.penrose-72l.pages.dev
Branch Preview URL:	https://update-existing-examples.penrose-72l.pages.dev

View logs

[codecov]

Codecov Report

Merging #1217 (e9bbd29) into main (a7aeadf) will not change coverage.
The diff coverage is n/a.

@@           Coverage Diff           @@
##             main    #1217   +/-   ##
=======================================
  Coverage   62.38%   62.38%           
=======================================
  Files          59       59           
  Lines        7111     7111           
  Branches     1660     1660           
=======================================
  Hits         4436     4436           
  Misses       2591     2591           
  Partials       84       84           

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[joshsunshine]

These look great!