pass looper's samples to pipestat summarize

pepkit · Dec 11, 2023 · 555f30c · 555f30c
1 parent 1e4b1eb
commit 555f30c
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/looper/looper.py b/looper/looper.py
@@ -552,7 +552,7 @@ def __call__(self, args):
             print(psms)
             for name, psm in psms.items():
                 # Summarize will generate the static HTML Report Function
-                report_directory = psm.summarize()
+                report_directory = psm.summarize(looper_samples=self.prj.samples)
                 print(f"Report directory: {report_directory}")
         else:
             for piface_source_samples in self.prj._samples_by_piface(
@@ -567,7 +567,7 @@ def __call__(self, args):
                 print(psms)
                 for name, psm in psms.items():
                     # Summarize will generate the static HTML Report Function
-                    report_directory = psm.summarize()
+                    report_directory = psm.summarize(looper_samples=self.prj.samples)
                     print(f"Report directory: {report_directory}")