add default_project_record_identifier if using {record_identifier} in…

… pipestat config
pepkit · Nov 30, 2023 · a0d65d5 · a0d65d5
1 parent c21660d
commit a0d65d5
Showing 1 changed file with 6 additions and 0 deletions.
diff --git a/looper/project.py b/looper/project.py
@@ -538,6 +538,12 @@ def _get_pipestat_configuration(self, sample_name=None, project_level=False):
                 {"project_name": pipestat_config_dict["project_name"]}
             )
 
+        if project_level and "{record_identifier}" in results_file_path:
+            # if project level and using {record_identifier}, pipestat needs some sort of record_identifier during creation
+            pipestat_config_dict.update(
+                {"record_identifier": "default_project_record_identifier"}
+            )
+
         pipestat_config_dict.update({"output_dir": output_dir})
 
         pifaces = (