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The main pipeline does not support Windows, since this operating system is not supported by SHAPEIT (phasing tool).
Nevertheless, we might fix this for a future release in case SHAPEIT releases a Windows version. Also, it might be interesting to support Windows for the companion tools (e.g.imputed-stats).
I think we will run into path compatibility problem when using:
in the tests module. We should rewrite those bits to:
I am not sure if we were going for Windows compatibility in the first place...
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