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@pgxcentre

Beaulieu-Saucier Université de Montréal Pharmacogenomics Centre

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  1. genipe genipe Public

    Genome-wide imputation pipeline

    Python 30 7

  2. region-plot region-plot Public

    A tool to plot significant regions of GWAS

    Python 28 6

  3. manhattan_generator manhattan_generator Public

    Manhattan plot Generator

    Python 24 8

  4. lambda lambda Public

    A python script to compute genomic inflation factor

    Python 2 3

  5. qqplot qqplot Public

    Tool to generate QQ plots.

    Python

  6. genetest genetest Public

    Python package for efficient genetic association analyses

    Python 3 2

Repositories

Showing 10 of 26 repositories
  • pyGenClean-PGx Public Forked from lemieuxl/pyGenClean

    Automated genetic data clean up procedure in Python for the PGx Centre.

    pgxcentre/pyGenClean-PGx’s past year of commit activity
    Python 0 GPL-3.0 2 0 0 Updated Sep 30, 2024
  • COLCOT-CH-scripts Public

    CHIP COLCOT sequencing data and variant calls processing scripts

    pgxcentre/COLCOT-CH-scripts’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Sep 20, 2024
  • genipe Public

    Genome-wide imputation pipeline

    pgxcentre/genipe’s past year of commit activity
    Python 30 GPL-3.0 7 7 0 Updated Jul 30, 2024
  • UKBPheWAS Public Forked from legaultmarc/UKBPheWAS
    pgxcentre/UKBPheWAS’s past year of commit activity
    Python 0 1 0 0 Updated Sep 18, 2023
  • geneparse Public

    Clean interface to parse genotype files

    pgxcentre/geneparse’s past year of commit activity
    Python 4 MIT 2 4 0 Updated Aug 28, 2023
  • region-plot Public

    A tool to plot significant regions of GWAS

    pgxcentre/region-plot’s past year of commit activity
    Python 28 6 4 0 Updated Jan 27, 2023
  • miami_generator Public

    A python tool to create beautiful Miami plots

    pgxcentre/miami_generator’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Jan 25, 2023
  • ExPheWAS Public

    Browser for the results of a gene-PC based pheWAS in the UK Biobank

    pgxcentre/ExPheWAS’s past year of commit activity
    Jupyter Notebook 5 MIT 0 2 0 Updated Jun 8, 2022
  • genetest Public

    Python package for efficient genetic association analyses

    pgxcentre/genetest’s past year of commit activity
    Python 3 2 9 0 Updated Oct 21, 2021
  • pheweb Public Forked from statgen/pheweb

    A tool to build multi-phenotype GWAS browsers

    pgxcentre/pheweb’s past year of commit activity
    Python 0 AGPL-3.0 66 0 0 Updated Feb 12, 2021
View all repositories

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