Merge pull request #137 from phac-nml/github-actions-ci

Github Action for CI

.github/workflows/ci.yml

@@ -0,0 +1,36 @@
+name: CI
+
+on:
+  push:
+    branches: [ master, development ]
+  pull_request:
+    branches: [ master, development ]
+
+jobs:
+  build:
+
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        python-version: [3.7, 3.8, 3.9]
+
+    steps:
+    - uses: actions/checkout@v2
+    - name: Set up Python ${{ matrix.python-version }}
+      uses: actions/setup-python@v2
+      with:
+        python-version: ${{ matrix.python-version }}
+    - name: Install dependencies
+      run: |
+        python -m pip install --upgrade pip
+        python -m pip install flake8 pytest
+        pip install .
+    - name: Lint with flake8
+      run: |
+        # stop the build if there are Python syntax errors or undefined names
+        flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
+        # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
+        flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
+    - name: Test with pytest
+      run: |
+        pytest

README.rst

@@ -1,19 +1,23 @@
 |logo|
 
-|conda| |nbsp| |pypi| |nbsp| |license| |nbsp| |nbsp| Master:|citest-master| |nbsp| Development:|citest-dev| |rtd|
+|conda| |nbsp| |pypi| |nbsp|  |rtd| |nbsp| |license|
 
 
+======  ===========
+Master  |ci-master|
+Dev     |ci-dev|
+======  ===========
 
 .. |logo| image:: logo.png
     :target: https://github.com/phac-nml/biohansel
 .. |pypi| image:: https://badge.fury.io/py/bio-hansel.svg
     :target: https://pypi.python.org/pypi/bio_hansel/
 .. |license| image:: https://img.shields.io/badge/License-Apache%20v2.0-blue.svg
     :target: http://www.apache.org/licenses/LICENSE-2.0
-.. |citest-dev|  image:: https://travis-ci.org/phac-nml/biohansel.svg?branch=development
-    :target: https://travis-ci.org/phac-nml/biohansel
-.. |citest-master| image:: https://travis-ci.org/phac-nml/biohansel.svg?branch=master
-    :target: https://travis-ci.org/phac-nml/biohansel
+.. |ci-master| image:: https://github.com/phac-nml/biohansel/workflows/CI/badge.svg?branch=master
+    :target: https://github.com/phac-nml/biohansel/actions
+.. |ci-dev| image:: https://github.com/phac-nml/biohansel/workflows/CI/badge.svg?branch=development
+    :target: https://github.com/phac-nml/biohansel/actions
 .. |conda|   image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg
     :target: https://bioconda.github.io/recipes/bio_hansel/README.html
 .. |nbsp| unicode:: 0xA0