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bio_hansel v2.0.0
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@peterk87 peterk87 released this 14 Jun 03:14
v2.0.0
d7e124f
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Learn about vigilant mode.

Changes:

  • bio_hansel now only uses Aho-Corasick string searching for finding kmers in sequences using the pyahocorasick Python library. NCBI BLAST+ and Jellyfish are no longer needed and have been removed as external dependencies.
  • Sorting inconsistent subtypes for QC reporting

Testing:

  • Travis CI config simplified; no longer need to download and install Conda since it's now using the Python installation available through Travis CI Linux VMs.
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