Releases: physimals/oxford_asl
Development release including Fabber and Basil dependencies and prototype GUI
These development packages include the Oxford ASL scripts, the basil, quasil and epi_reg scripts and the fabber_asl executable. It also includes a preview of a simple wxpython based GUI script.
The scripts have been modified so that they when calling a 'helper' program (e.g. asl_file, basil, fabber_asl, they will always take the version from the same directory as the calling script if one exists, if not the version from $FSLDIR/bin, and if not anything it can find in your $PATH.
This should make it easier to work with multiple versions of the scripts and their dependencies without having to install them into $FSLDIR, overwriting existing version. It also makes it easier to produce release with some dependencies bundled, as we have here.
The GUI requires wxpython, matplotlib, numpy and nibabel. These should be readily available for most systems and most Python distributions.
This release adds turbo-quasar additions, ASL_MFREE and fixes to the GUI.
Ubuntu 16.04
oxford_asl-3.9.6-ubuntu.tar.gz
Centos 7
oxford_asl-3.9.6-centos7.tar.gz
Centos 6.5
oxford_asl-3.9.6-centos6.tar.gz
Centos 5.11
oxford_asl-3.9.6-centos5.tar.gz
OSX El Capitan 10.11.6
Development release including Fabber and Basil dependencies and prototype GUI
These development packages include the Oxford ASL scripts, the basil, quasil and epi_reg scripts and the fabber_asl executable. It also includes a preview of a simple wxpython based GUI script.
The scripts have been modified so that they when calling a 'helper' program (e.g. asl_file, basil, fabber_asl, they will always take the version from the same directory as the calling script if one exists, if not the version from $FSLDIR/bin, and if not anything it can find in your $PATH.
This should make it easier to work with multiple versions of the scripts and their dependencies without having to install them into $FSLDIR, overwriting existing version. It also makes it easier to produce release with some dependencies bundled, as we have here.
The GUI requires wxpython, matplotlib, numpy and nibabel. These should be readily available for most systems and most Python distributions.
This release fixes bugs in PLD specification and variable repeats.
Ubuntu 16.04
oxford_asl-3.9.5-ubuntu.tar.gz
Centos 7
oxford_asl-3.9.5-centos7.tar.gz
Centos 6.5
oxford_asl-3.9.5-centos6.tar.gz
Centos 5.11
oxford_asl-3.9.5-centos5.tar.gz
OSX Sierra
Development release including Fabber and Basil dependencies and prototype GUI
These development packages include the Oxford ASL scripts, the basil, quasil and epi_reg scripts and the fabber_asl executable. It also includes a simply wxpython based GUI script.
The scripts have been modified so that they when calling a 'helper' program (e.g. asl_file, basil, fabber_asl, they will always take the version from the same directory as the calling script if one exists, if not the version from $FSLDIR/bin, and if not anything it can find in your $PATH.
This should make it easier to work with multiple versions of the scripts and their dependencies without having to install them into $FSLDIR, overwriting existing version. It also makes it easier to produce release with some dependencies bundled, as we have here.
The GUI requires wxpython, matplotlib, numpy and nibabel. These should be readily available for most systems and most Python distributions.
This release adds partial volume correction to QUASIL
Ubuntu 16.04
oxford_asl-3.9.4-ubuntu.tar.gz
Centos 7
oxford_asl-3.9.4-centos7.tar.gz
Centos 6.5
Centos 5.11
OSX El Capitan 10.11.6
Development release including Fabber and Basil dependencies and prototype GUI
These development packages include the Oxford ASL scripts, the basil, quasil and epi_reg scripts and the fabber_asl executable. It also includes a simply wxpython based GUI script.
The scripts have been modified so that they when calling a 'helper' program (e.g. asl_file, basil, fabber_asl, they will always take the version from the same directory as the calling script if one exists, if not the version from $FSLDIR/bin, and if not anything it can find in your $PATH.
This should make it easier to work with multiple versions of the scripts and their dependencies without having to install them into $FSLDIR, overwriting existing version. It also makes it easier to produce release with some dependencies bundled, as we have here.
The GUI requires wxpython, matplotlib, numpy and nibabel. These should be readily available for most systems and most Python distributions.
This release fixes some issues with Fabber
Ubuntu 16.04
oxford_asl-3.9.3-ubuntu.tar.gz
Centos 7
oxford_asl-3.9.3-centos7.tar.gz
Centos 6.5
oxford_asl-3.9.3-centos6.tar.gz
Centos 5.11
oxford_asl-3.9.3-centos5.tar.gz
OSX El Capitan 10.11.6
Development release including Fabber and Basil dependencies and prototype GUI
These development packages include the Oxford ASL scripts, the basil, quasil and epi_reg scripts and the fabber_asl executable. It also includes a simply wxpython based GUI script.
The scripts have been modified so that they when calling a 'helper' program (e.g. asl_file, basil, fabber_asl, they will always take the version from the same directory as the calling script if one exists, if not the version from $FSLDIR/bin, and if not anything it can find in your $PATH.
This should make it easier to work with multiple versions of the scripts and their dependencies without having to install them into $FSLDIR, overwriting existing version. It also makes it easier to produce release with some dependencies bundled, as we have here.
The GUI requires wxpython, matplotlib, numpy and nibabel. These should be readily available for most systems and most Python distributions.
Ubuntu 16.04
oxford_asl-3.9.2-ubuntu.tar.gz
Centos 6.5
oxford_asl-3.9.2-centos6.tar.gz
OSX El Capitan 10.11.6
Centos 5.11
Development release including Fabber and Basil dependencies
This development release includes the Oxford ASL scripts, the basil and epi_reg scripts and the fabber_asl executable.
The scripts have been modified so that they when calling a 'helper' program (e.g. asl_file, basil, fabber_asl, they will always take the version from the same directory as the calling script if one exists, if not the version from $FSLDIR/bin, and if not anything it can find in your $PATH.
This should make it easier to work with multiple versions of the scripts and their dependencies without having to install them into $FSLDIR, overwriting existing version. It also makes it easier to produce release with some dependencies bundled, as we have here.
Updated Wed 19 Apr 2017, new packages to fix Basil issue
Ubuntu 16.04
oxford_asl-3.9.1-ubuntu.tar.gz
Centos 6.5
oxford_asl-3.9.1-centos.tar.gz
OSX El Capitan 10.11.6
Development release
This release had issues and has been superceded. Please do not use!