chore(release): 0.2.0

Signed-off-by: Cameron Smith <cameron.ray.smith@gmail.com>
pinellolab · Jul 12, 2024 · e8666a1 · e8666a1
1 parent 7df4ce4
commit e8666a1
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Showing 8 changed files with 19 additions and 15 deletions.
diff --git a/MODULE.bazel b/MODULE.bazel
@@ -4,7 +4,7 @@ pyrovelocity MODULE
 
 module(
     name = "pyrovelocity",
-    version = "0.2.0b22",
+    version = "0.2.0",
     compatibility_level = 1,
 )
 

diff --git a/Makefile b/Makefile
@@ -913,8 +913,8 @@ approve-prs: ## Approve github pull requests from bots: PR_ENTRIES="2-5 10 12-18
 		fi; \
 	done
 
-PREVIOUS_VERSION := 0.2.0b21
-NEXT_VERSION := 0.2.0b22
+PREVIOUS_VERSION := 0.2.0b22
+NEXT_VERSION := 0.2.0
 VERSION_FILES := \
 	pyproject.toml \
 	conda/colab/construct.yaml \

diff --git a/conda/colab/construct.yaml b/conda/colab/construct.yaml
@@ -1,5 +1,5 @@
 name: pyrovelocity-colab
-version: 0.2.0b22
+version: 0.2.0
 
 channels:
   - pytorch

diff --git a/containers/gpu.Dockerfile b/containers/gpu.Dockerfile
@@ -77,7 +77,7 @@ COPY . /root
 # development
 RUN pip install --no-deps -e .
 # distribution
-# RUN pip install pyrovelocity==0.2.0b22
+# RUN pip install pyrovelocity==0.2.0
 
 ARG tag
 ENV FLYTE_INTERNAL_IMAGE $tag
diff --git a/containers/pkg.Dockerfile b/containers/pkg.Dockerfile
@@ -34,7 +34,7 @@ COPY . /root
 # development
 RUN pip install --no-deps -e .
 # distribution
-# RUN pip install pyrovelocity==0.2.0b22
+# RUN pip install pyrovelocity==0.2.0
 
 ARG tag
 ENV FLYTE_INTERNAL_IMAGE $tag
diff --git a/docs/source/notebooks/pyrovelocity_colab_template.ipynb b/docs/source/notebooks/pyrovelocity_colab_template.ipynb
@@ -70,10 +70,11 @@
         }
       ],
       "source": [
-        "pyrovelocity_version = \"0.2.0b22\"\n",
-        "pyrovelocity_colab_script_url = \\\n",
-        "\"https://storage.googleapis.com/pyrovelocity/data/scripts/\" + \\\n",
-        "f\"pyrovelocity-colab-{pyrovelocity_version}-Linux-x86_64.sh\"\n",
+        "pyrovelocity_version = \"0.2.0\"\n",
+        "pyrovelocity_colab_script_url = (\n",
+        "    \"https://storage.googleapis.com/pyrovelocity/data/scripts/\"\n",
+        "    + f\"pyrovelocity-colab-{pyrovelocity_version}-Linux-x86_64.sh\"\n",
+        ")\n",
         "\n",
         "!pip install -q condacolab\n",
         "import condacolab\n",
@@ -116,7 +117,7 @@
         "\n",
         "# change the branch argument from a tag to a branch in development\n",
         "git clone \\\n",
-        "--branch beta \\\n",
+        "--branch main \\\n",
         "https://github.com/pinellolab/pyrovelocity.git"
       ]
     },
@@ -141,6 +142,7 @@
       "source": [
         "!pip install --user --no-deps -e pyrovelocity\n",
         "from IPython import get_ipython\n",
+        "\n",
         "get_ipython().kernel.do_shutdown(True)"
       ]
     },
@@ -173,6 +175,7 @@
       "outputs": [],
       "source": [
         "import pyrovelocity\n",
+        "\n",
         "print(pyrovelocity.__file__)\n",
         "print(pyrovelocity.__version__)"
       ]

diff --git a/pyproject.toml b/pyproject.toml
@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "pyrovelocity"
-version = "0.2.0b22"
+version = "0.2.0"
 packages = [{ include = "pyrovelocity", from = "src" }]
 description = "A multivariate RNA Velocity model to estimate future cell states with uncertainty using probabilistic modeling with pyro."
 authors = ["pyrovelocity team"]

diff --git a/scripts/conda b/scripts/conda
@@ -3,10 +3,11 @@
 set -euo pipefail
 
 PACKAGE_NAME="pyrovelocity"
-PACKAGE_VERSION="0.2.0b22"
+PACKAGE_VERSION="0.2.0"
 CONDA_BUILD_STRING="pyhff70e4c"
 CONDA_BUILD_NUMBER="0"
-CONDA_CHANNEL_LABEL="pyrovelocity_dev"
+# CONDA_CHANNEL_LABEL="pyrovelocity_dev"
+CONDA_CHANNEL_LABEL="main"
 VERBOSE=0
 USE_COLOR=true
 
@@ -31,7 +32,7 @@ Example:
 
     ./conda \\
     --name pyrovelocity \\
-    --version 0.2.0b22.dev1 \\
+    --version 0.2.0.dev1 \\
     --build-string pyhff70e4c \\
     --build-number 0 \\
     --label pyrovelocity_dev