Release 0.9.0

Gemfile

@@ -11,6 +11,6 @@ group :development do
   gem "bundler", "~> 1.0.0"
   gem "jeweler", "~> 1.5.2"
   gem "rcov", ">= 0"
-  gem "bio", ">= 1.4.1"
-  gem "rspec", ">= 2.0"
+  # gem "bio", ">= 1.4.1"
+  gem "rspec", ">= 2.3.0"
 end

Gemfile.lock

@@ -1,7 +1,6 @@
 GEM
   remote: http://rubygems.org/
   specs:
-    bio (1.4.1)
     diff-lcs (1.1.2)
     git (1.2.5)
     jeweler (1.5.2)
@@ -25,10 +24,9 @@ PLATFORMS
   ruby
 
 DEPENDENCIES
-  bio (>= 1.4.1)
   bundler (~> 1.0.0)
   jeweler (~> 1.5.2)
   log4r (>= 1.1.9)
   rcov
-  rspec (>= 2.0)
+  rspec (>= 2.3.0)
   shoulda

Rakefile

@@ -21,8 +21,8 @@ Jeweler::Tasks.new do |gem|
   gem.authors = ["Pjotr Prins"]
   # Include your dependencies below. Runtime dependencies are required when using your gem,
   # and development dependencies are only needed for development (ie running rake tasks, tests, etc)
-  gem.add_runtime_dependency 'log4r', '> 1.1.6'
-  gem.add_development_dependency 'rspec', '> 1.2.3'
+  # gem.add_runtime_dependency 'log4r', '> 1.1.6'
+  # gem.add_development_dependency 'rspec', '>= 2.3.0'
 end
 Jeweler::RubygemsDotOrgTasks.new
 

bio-logger.gemspec

@@ -5,11 +5,11 @@
 
 Gem::Specification.new do |s|
   s.name = %q{bio-logger}
-  s.version = "0.6.1"
+  s.version = "0.9.0"
 
   s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
   s.authors = ["Pjotr Prins"]
-  s.date = %q{2011-01-12}
+  s.date = %q{2011-01-17}
   s.description = %q{Log4r wrapper for BioRuby}
   s.email = %q{pjotr.public01@thebird.nl}
   s.extra_rdoc_files = [
@@ -28,8 +28,10 @@ Gem::Specification.new do |s|
     "lib/bio-logger.rb",
     "lib/bio/log/logger.rb",
     "lib/bio/log/loggercli.rb",
+    "lib/bio/log/loggerfilter.rb",
     "lib/bio/log/loggersublevels.rb",
     "lib/bio/log/loggerusers.rb",
+    "lib/bio/log/patchlog4r.rb",
     "spec/biologger_cli_spec.rb",
     "spec/biologger_spec.rb",
     "test/helper.rb",
@@ -52,30 +54,27 @@ Gem::Specification.new do |s|
     s.specification_version = 3
 
     if Gem::Version.new(Gem::VERSION) >= Gem::Version.new('1.2.0') then
+      s.add_runtime_dependency(%q<log4r>, [">= 1.1.9"])
       s.add_development_dependency(%q<shoulda>, [">= 0"])
       s.add_development_dependency(%q<bundler>, ["~> 1.0.0"])
       s.add_development_dependency(%q<jeweler>, ["~> 1.5.2"])
       s.add_development_dependency(%q<rcov>, [">= 0"])
-      s.add_development_dependency(%q<bio>, [">= 1.4.1"])
-      s.add_runtime_dependency(%q<log4r>, ["> 1.1.6"])
-      s.add_development_dependency(%q<rspec>, ["> 1.2.3"])
+      s.add_development_dependency(%q<rspec>, [">= 2.3.0"])
     else
+      s.add_dependency(%q<log4r>, [">= 1.1.9"])
       s.add_dependency(%q<shoulda>, [">= 0"])
       s.add_dependency(%q<bundler>, ["~> 1.0.0"])
       s.add_dependency(%q<jeweler>, ["~> 1.5.2"])
       s.add_dependency(%q<rcov>, [">= 0"])
-      s.add_dependency(%q<bio>, [">= 1.4.1"])
-      s.add_dependency(%q<log4r>, ["> 1.1.6"])
-      s.add_dependency(%q<rspec>, ["> 1.2.3"])
+      s.add_dependency(%q<rspec>, [">= 2.3.0"])
     end
   else
+    s.add_dependency(%q<log4r>, [">= 1.1.9"])
     s.add_dependency(%q<shoulda>, [">= 0"])
     s.add_dependency(%q<bundler>, ["~> 1.0.0"])
     s.add_dependency(%q<jeweler>, ["~> 1.5.2"])
     s.add_dependency(%q<rcov>, [">= 0"])
-    s.add_dependency(%q<bio>, [">= 1.4.1"])
-    s.add_dependency(%q<log4r>, ["> 1.1.6"])
-    s.add_dependency(%q<rspec>, ["> 1.2.3"])
+    s.add_dependency(%q<rspec>, [">= 2.3.0"])
   end
 end
 

lib/bio/log/loggercli.rb

@@ -82,7 +82,7 @@ def CLI::configure logname = nil
         default = trace[:default] if trace[:default]
         trace[logname] ||= {} if logname
         trace.each do | name, opts |
-          p [name, opts]
+          # p [name, opts]
           next if name == :default
           logger_type = type
           logger_type = default[:outputter_name] if default[:outputter_name]