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In the section 'Fitting multiple factors', the line
% th2 = fitFactor(sclvmMult, idx = idx_Th2, XKnown = Xcc, k = 1, interaction=TRUE)
returns an error message of the type
% 'module' object has no attribute 'CFixedCF'.
Do you have an explanation and possibly a solution for that?
Thanks,
Jens
The text was updated successfully, but these errors were encountered:
I cannot seem to get past this part either. I am having trouble including additional covariates when using the fitFactor() function. In particular, when including a binary treatment/control vector, I get the following error.
Error in python.exec(paste("X,K,Kint,varGPLVM_ARD = ", objName, ".fitFactor(idx=idx, X0=X0, k=k,standardize=standardize, use_ard=use_ard, interaction=interaction, initMethod=initMethod)", :
ufunc 'divide' output (typecode 'd') could not be coerced to provided output parameter (typecode 'l') according to the casting rule ''same_kind''
Dear Authors,
I am running the vignette
https://github.com/PMBio/scLVM/blob/master/R/tutorials/scLVM_vignette.Rmd
on the current (cloned) version of scLVM
https://github.com/PMBio/scLVM/blob/master/R/scLVM_0.99.2.tar.gz.
In the section 'Fitting multiple factors', the line
% th2 = fitFactor(sclvmMult, idx = idx_Th2, XKnown = Xcc, k = 1, interaction=TRUE)
returns an error message of the type
% 'module' object has no attribute 'CFixedCF'.
Do you have an explanation and possibly a solution for that?
Thanks,
Jens
The text was updated successfully, but these errors were encountered: