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  1. Fast taxonomic classification of metagenomic sequencing reads using a protein reference database

    C 194 61

  2. packCircles Public

    C program for space-efficiently packing circles in a plane.

    C 13 1

  3. Score and compare multiple bacterial genome assemblies (Illumina, Nanopore) to reference genome(s)

    Python 16 1

  4. Snakemake workflow for bacterial genome assembly + polishing for Oxford Nanopore (ONT) sequencing using multiple tools

    Python 13 1

  5. C++ tools for NCBI taxonomy tasks

    C++ 10 3

  6. kiq Public

    K-mer indexing and querying in RNA-Seq data

    C++ 4

727 contributions in the last year

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep Mon Wed Fri

Contribution activity

September 2022

Created an issue in BookStackApp/BookStack that received 2 comments

add list of chapters to JSON data in books/read API endpoint

API Endpoint or Feature For the sake of completeness, the JSON data returned by the books/read API endpoint /api/books/{id} (docs) should contain a…

Opened 2 other issues in 1 repository
pmenzel/ont-assembly-snake 2 open
24 contributions in private repositories Sep 7 – Sep 25

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