Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Use SymPy version 1.9 #138

Merged
merged 18 commits into from
Jul 18, 2023
Merged
2 changes: 1 addition & 1 deletion pyproject.toml
Original file line number Diff line number Diff line change
Expand Up @@ -17,7 +17,7 @@ maintainers = [
keywords = ["math"]
classifiers = ["Programming Language :: Python :: 3"]
dependencies = [
'sympy >= 1.2, < 1.7',
'sympy >= 1.5, < 1.10',
'h5py',
'pytest',
'pyyaml',
Expand Down
13 changes: 7 additions & 6 deletions sympde/__init__.py
Original file line number Diff line number Diff line change
@@ -1,6 +1,7 @@
from .version import __version__
from .core import *
from .topology import *
from .exterior import *
from .printing import *
from .utilities import *
from .version import __version__
from .old_sympy_utilities import with_metaclass
from .core import *
from .topology import *
from .exterior import *
from .printing import *
from .utilities import *
2 changes: 1 addition & 1 deletion sympde/calculus/core.py
Original file line number Diff line number Diff line change
Expand Up @@ -102,8 +102,8 @@
from sympy.core.containers import Tuple
from sympy.core.singleton import S
from sympy.core.decorators import call_highest_priority
from sympy.core.compatibility import is_sequence

from sympde.old_sympy_utilities import is_sequence
from sympde.core.basic import CalculusFunction
from sympde.core.basic import _coeffs_registery
from sympde.topology.space import ScalarFunction, VectorFunction
Expand Down
4 changes: 2 additions & 2 deletions sympde/calculus/tests/test_calculus.py
Original file line number Diff line number Diff line change
Expand Up @@ -537,11 +537,11 @@ def test_calculus_2d_5():
#==============================================================================

def teardown_module():
from sympy import cache
from sympy.core import cache
cache.clear_cache()

def teardown_function():
from sympy import cache
from sympy.core import cache
cache.clear_cache()

#test_calculus_2d_1()
Expand Down
4 changes: 1 addition & 3 deletions sympde/core/algebra.py
Original file line number Diff line number Diff line change
Expand Up @@ -25,18 +25,16 @@
from sympy import Mul, Add
from sympy import postorder_traversal
from sympy import preorder_traversal

from sympy.core.expr import Expr
from sympy.core.containers import Tuple
from sympy import Integer, Float

from sympy import Add, Mul
from sympy import simplify
from sympy import S
from sympy.core.compatibility import is_sequence
from sympy import Basic
from sympy import Indexed, IndexedBase

from sympde.old_sympy_utilities import is_sequence
from .basic import CalculusFunction
from .basic import _coeffs_registery

Expand Down
13 changes: 7 additions & 6 deletions sympde/expr/expr.py
Original file line number Diff line number Diff line change
Expand Up @@ -9,8 +9,8 @@
from sympy.core import Expr, Add, Mul
from sympy.core.numbers import Zero as sy_Zero
from sympy.core.containers import Tuple
from sympy.core.compatibility import is_sequence

from sympde.old_sympy_utilities import is_sequence
from sympde.core.basic import CalculusFunction
from sympde.core.basic import Constant
from sympde.core.utils import random_string
Expand Down Expand Up @@ -396,7 +396,7 @@ def __call__(self, *tests, **kwargs):
# Make sure that 'values' is always a list
if len(tests) == 1:
values = tests[0]
if not is_sequence(values):
if not is_sequence(values, vector=isinstance(values, VectorFunction)):
values = [values]
else:
values = tests
Expand Down Expand Up @@ -502,8 +502,8 @@ def __call__(self, trials, tests, **kwargs):
expr = self._update_free_variables(**kwargs)

# If needed, convert positional arguments to lists
if not is_sequence(trials): trials = [trials]
if not is_sequence(tests ): tests = [tests ]
if not is_sequence(trials, vector=isinstance(trials, VectorFunction)): trials = [trials]
if not is_sequence(tests, vector=isinstance(tests, VectorFunction)): tests = [tests ]

# Concatenate input values into single list
values = [*trials, *tests]
Expand Down Expand Up @@ -652,8 +652,9 @@ def linearize(form, fields, trials=None):
for I in integrals:

g0 = I.expr
g1 = I.expr.subs(zip(fields, new_fields)).expand()
dg_du = ((g1-g0)/eps).series(eps, 0, 2).subs(eps, 0)
g1 = I.expr.subs(zip(fields, new_fields))
temp=((g1-g0)/eps).expand()
dg_du = (temp).series(eps, 0, 2).subs(eps, 0)

if dg_du:
new_I = integral(I.domain, dg_du)
Expand Down
4 changes: 2 additions & 2 deletions sympde/expr/tests/test_equation_2d.py
Original file line number Diff line number Diff line change
Expand Up @@ -409,10 +409,10 @@ def test_equation_2d_6():
#==============================================================================

def teardown_module():
from sympy import cache
from sympy.core import cache
cache.clear_cache()

def teardown_function():
from sympy import cache
from sympy.core import cache
cache.clear_cache()

4 changes: 2 additions & 2 deletions sympde/expr/tests/test_essential_bc.py
Original file line number Diff line number Diff line change
Expand Up @@ -69,9 +69,9 @@ def test_essential_bc_1():
#==============================================================================

def teardown_module():
from sympy import cache
from sympy.core import cache
cache.clear_cache()

def teardown_function():
from sympy import cache
from sympy.core import cache
cache.clear_cache()
6 changes: 3 additions & 3 deletions sympde/expr/tests/test_expr.py
Original file line number Diff line number Diff line change
Expand Up @@ -1155,7 +1155,7 @@ def test_area_2d_1():

mu = Constant('mu' , is_real=True)

e = ElementDomain(domain)
e = ElementDomain()
area = Area(e)

V = ScalarFunctionSpace('V', domain)
Expand Down Expand Up @@ -1896,9 +1896,9 @@ def test_interface_integral_4():
#==============================================================================

def teardown_module():
from sympy import cache
from sympy.core import cache
cache.clear_cache()

def teardown_function():
from sympy import cache
from sympy.core import cache
cache.clear_cache()
4 changes: 2 additions & 2 deletions sympde/expr/tests/test_find_2d.py
Original file line number Diff line number Diff line change
Expand Up @@ -144,9 +144,9 @@ def test_find_2d_1():
#==============================================================================

def teardown_module():
from sympy import cache
from sympy.core import cache
cache.clear_cache()

def teardown_function():
from sympy import cache
from sympy.core import cache
cache.clear_cache()
4 changes: 2 additions & 2 deletions sympde/expr/tests/test_newton_2d.py
Original file line number Diff line number Diff line change
Expand Up @@ -50,9 +50,9 @@ def test_newton_2d_1():
#==============================================================================

def teardown_module():
from sympy import cache
from sympy.core import cache
cache.clear_cache()

def teardown_function():
from sympy import cache
from sympy.core import cache
cache.clear_cache()
4 changes: 2 additions & 2 deletions sympde/expr/tests/test_tensor_2d.py
Original file line number Diff line number Diff line change
Expand Up @@ -126,9 +126,9 @@ def test_tensorize_2d_3():
#==============================================================================

def teardown_module():
from sympy import cache
from sympy.core import cache
cache.clear_cache()

def teardown_function():
from sympy import cache
from sympy.core import cache
cache.clear_cache()
1 change: 0 additions & 1 deletion sympde/exterior/calculus.py
Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,6 @@
from sympy import Function
from sympy import Integer, Float
from sympy.core.singleton import Singleton
from sympy.core.compatibility import with_metaclass
from sympy.core import Add, Mul
from sympy.core.singleton import S

Expand Down
3 changes: 1 addition & 2 deletions sympde/exterior/datatype.py
Original file line number Diff line number Diff line change
Expand Up @@ -11,14 +11,13 @@
from sympy import Function
from sympy import Integer, Float
from sympy.core.singleton import Singleton
from sympy.core.compatibility import with_metaclass
from sympy.core import Add, Mul
from sympy.core.singleton import S

from sympde.old_sympy_utilities import with_metaclass
from sympde.core.basic import _coeffs_registery
from sympde.core import LinearOperator


#==============================================================================
class FormType(with_metaclass(Singleton, Basic)):
"""Base class representing differential form types"""
Expand Down
1 change: 0 additions & 1 deletion sympde/exterior/form.py
Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,6 @@
from sympy import Function
from sympy import Integer, Float
from sympy.core.singleton import Singleton
from sympy.core.compatibility import with_metaclass
from sympy.core import Add, Mul
from sympy.core.singleton import S

Expand Down
1 change: 0 additions & 1 deletion sympde/exterior/inference.py
Original file line number Diff line number Diff line change
Expand Up @@ -11,7 +11,6 @@
from sympy import Function
from sympy import Integer, Float
from sympy.core.singleton import Singleton
from sympy.core.compatibility import with_metaclass
from sympy.core import Add, Mul
from sympy.core.singleton import S

Expand Down
4 changes: 2 additions & 2 deletions sympde/exterior/tests/test_compiler.py
Original file line number Diff line number Diff line change
Expand Up @@ -287,11 +287,11 @@ def test_compiler_3d_stokes():
#==============================================================================

def teardown_module():
from sympy import cache
from sympy.core import cache
cache.clear_cache()

def teardown_function():
from sympy import cache
from sympy.core import cache
cache.clear_cache()

#test_compiler_3d_1()
Expand Down
4 changes: 2 additions & 2 deletions sympde/exterior/tests/test_datatype.py
Original file line number Diff line number Diff line change
Expand Up @@ -28,11 +28,11 @@ def test_datatype_1():
#==============================================================================

def teardown_module():
from sympy import cache
from sympy.core import cache
cache.clear_cache()

def teardown_function():
from sympy import cache
from sympy.core import cache
cache.clear_cache()

#test_datatype_1()
4 changes: 2 additions & 2 deletions sympde/exterior/tests/test_exterior.py
Original file line number Diff line number Diff line change
Expand Up @@ -74,11 +74,11 @@ def test_exterior_1():
#==============================================================================

def teardown_module():
from sympy import cache
from sympy.core import cache
cache.clear_cache()

def teardown_function():
from sympy import cache
from sympy.core import cache
cache.clear_cache()

#test_exterior_1()
4 changes: 2 additions & 2 deletions sympde/exterior/tests/test_inference.py
Original file line number Diff line number Diff line change
Expand Up @@ -78,11 +78,11 @@ def test_type_inference_1():
#==============================================================================

def teardown_module():
from sympy import cache
from sympy.core import cache
cache.clear_cache()

def teardown_function():
from sympy import cache
from sympy.core import cache
cache.clear_cache()

#test_type_inference_1()