Redesign Build System for PyNE with Scikit-Build #22
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| name: Quick Wheel test | |
| on: | |
| # allows running workflows manually | |
| workflow_dispatch: | |
| pull_request: | |
| branches: | |
| - develop | |
| paths-ignore: | |
| - docs/** | |
| push: | |
| branches: | |
| - develop | |
| paths-ignore: | |
| - docs/** | |
| jobs: | |
| main: | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest, windows-latest, macos-latest] | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: 3.x | |
| - name: Install hdf5 Ubuntu | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y gfortran libblas-dev liblapack-dev libeigen3-dev libhdf5-dev hdf5-tools | |
| # hdf5 std directory | |
| hdf5_libdir=/usr/lib/x86_64-linux-gnu/hdf5/serial | |
| # need to put libhdf5.so on LD_LIBRARY_PATH | |
| if [ -z $LD_LIBRARY_PATH ]; then | |
| export LD_LIBRARY_PATH="${hdf5_libdir}:$GITHUB_WORKSPACE/lib" | |
| else | |
| export LD_LIBRARY_PATH="${hdf5_libdir}:$GITHUB_WORKSPACE/lib:$LD_LIBRARY_PATH" | |
| fi | |
| if: matrix.os == 'ubuntu-latest' | |
| - name: Install Miniconda Windows | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| auto-activate-base: true | |
| activate-environment: "" | |
| if: matrix.os == 'windows-latest' | |
| - name: Install hdf5 Windows | |
| run: | | |
| conda install curl eigen | |
| conda install -c conda-forge hdf5 | |
| conda remove -y yaml-cpp | |
| echo "HOME_PATH=$GITHUB_WORKSPACE/.." >> $GITHUB_ENV | |
| echo "CONDA_LOC=C:/Miniconda/Library" >> $GITHUB_ENV | |
| $hdf5_libdir="C:/Miniconda/Library" | |
| if: matrix.os == 'windows-latest' | |
| - name: Install hdf5 MacOS | |
| run: | | |
| brew install hdf5 eigen | |
| echo "HOME=$GITHUB_WORKSPACE/.." >> $GITHUB_ENV | |
| hdf5_libdir=$HDF5_PATH | |
| if: matrix.os == 'macos-latest' | |
| - name: Install MOAB | |
| run: | | |
| cd $GITHUB_WORKSPACE | |
| python -m pip install "cython<3" numpy | |
| # clone and version | |
| git clone --depth 1 https://bitbucket.org/fathomteam/moab -b 5.3.0 moab-repo | |
| cd moab-repo | |
| mkdir -p build | |
| cd build | |
| # cmake, build and install | |
| cmake ../ -DENABLE_HDF5=ON \ | |
| -DHDF5_ROOT=$hdf5_libdir \ | |
| -DBUILD_SHARED_LIBS=ON \ | |
| -DENABLE_PYMOAB=ON \ | |
| -DENABLE_BLASLAPACK=OFF \ | |
| -DENABLE_FORTRAN=OFF \ | |
| -DCMAKE_INSTALL_PREFIX=$GITHUB_WORKSPACE | |
| make | |
| make install | |
| cd $GITHUB_WORKSPACE | |
| # Remove the temporary directory | |
| rm -rf $GITHUB_WORKSPACE/moab-repo | |
| echo "MOAB installed" | |
| - name: Install DAGMC | |
| run: | | |
| cd $GITHUB_WORKSPACE | |
| # make a new temporary directory | |
| # clone the repository | |
| git clone https://github.com/ahnaf-tahmid-chowdhury/DAGMC.git dagmc-repo | |
| cd dagmc-repo | |
| mkdir -p build | |
| cd build | |
| # cmake, build and install | |
| cmake ../ -DMOAB_CMAKE_CONFIG=$GITHUB_WORKSPACE/lib/cmake/MOAB \ | |
| -DMOAB_DIR=$GITHUB_WORKSPACE \ | |
| -DBUILD_STATIC_LIBS=OFF \ | |
| -DBUILD_TALLY=ON \ | |
| -DCMAKE_INSTALL_PREFIX=$GITHUB_WORKSPACE | |
| make | |
| make install | |
| cd $GITHUB_WORKSPACE | |
| # Remove the temporary directory | |
| rm -rf "$GITHUB_WORKSPACE/dagmc-repo" | |
| echo "DAGMC installed" | |
| - name: Checkout code | |
| uses: actions/checkout@v3 | |
| - name: Build wheels | |
| run: | | |
| export MOAB_ROOT=$GITHUB_WORKSPACE | |
| export DAGMC_ROOT=$GITHUB_WORKSPACE | |
| python setup.py bdist_wheel | |
| - name: Install PyNE | |
| run: | | |
| python -m pip install dist/pyne*.whl | |
| - name: Install pytest | |
| run: | | |
| python -m pip install pytest | |
| - name: Test PyNE | |
| run: python -m pytest -ra tests |