Merge pull request #418 from ericpre/unpin_dask

Unpin dask following dask 2021.8.1

.all-contributorsrc

@@ -57,6 +57,16 @@
         "code",
         "review"
       ]
+    },
+    {
+      "login": "ericpre",
+      "name": "Eric Prestat",
+      "avatar_url": "https://avatars.githubusercontent.com/u/11851990?v=4",
+      "profile": "https://github.com/ericpre",
+      "contributions": [
+        "code",
+        "maintenance"
+      ]
     }
   ]
-}
+}

.github/workflows/build.yml

@@ -40,7 +40,7 @@ jobs:
           - os: ubuntu-latest
             python-version: 3.7
             OLDEST_SUPPORTED_VERSION: true
-            DEPENDENCIES: dask==2.18 diffsims==0.4.0 hyperspy==1.5.2 matplotlib==3.3 numpy==1.19 orix==0.6.0 scikit-image==0.16.2
+            DEPENDENCIES: dask==2021.8.1 diffsims==0.4.0 hyperspy==1.6.4 matplotlib==3.3 numba==0.48 numpy==1.19 orix==0.6.0 scikit-image==0.16.2
     steps:
       - uses: actions/checkout@v2
       - name: Set up Python ${{ matrix.python-version }}
@@ -49,12 +49,12 @@ jobs:
           python-version: ${{ matrix.python-version }}
       - name: Display versions
         run: python -V; pip -V
-      - name: Install depedencies and package
-        shell: bash
-        run: pip install -U -e .'[tests]'
       - name: Install oldest supported version
         if: ${{ matrix.OLDEST_SUPPORTED_VERSION }}
         run: pip install ${{ matrix.DEPENDENCIES }}
+      - name: Install depedencies and package
+        shell: bash
+        run: pip install -U -e .'[tests]'
       - name: Run docstring tests
         if: ${{ matrix.os == 'ubuntu-latest' }}
         run: pytest --doctest-modules --ignore-glob=kikuchipy/*/tests

README.md

@@ -39,6 +39,7 @@ Thanks goes to these wonderful people ([emoji key](https://allcontributors.org/d
 <!-- markdownlint-disable -->
 <table>
   <tr>
+    <td align="center"><a href="https://github.com/ericpre"><img src="https://avatars.githubusercontent.com/u/11851990?v=4?s=100" width="100px;" alt=""/><br /><sub><b>Eric Prestat</b></sub></a><br /><a href="https://github.com/pyxem/kikuchipy/commits?author=ericpre" title="Code">💻</a> <a href="#maintenance-ericpre" title="Maintenance">🚧</a></td>
     <td align="center"><a href="https://www.ntnu.edu/employees/hakon.w.anes"><img src="https://avatars.githubusercontent.com/u/12139781?v=4?s=100" width="100px;" alt=""/><br /><sub><b>Håkon Wiik Ånes</b></sub></a><br /></td>
     <td align="center"><a href="https://github.com/friedkitteh"><img src="https://avatars.githubusercontent.com/u/11888052?v=4?s=100" width="100px;" alt=""/><br /><sub><b>Lars Lervik</b></sub></a><br /><a href="https://github.com/pyxem/kikuchipy/issues?q=author%3Afriedkitteh" title="Bug reports">🐛</a> <a href="https://github.com/pyxem/kikuchipy/commits?author=friedkitteh" title="Code">💻</a> <a href="https://github.com/pyxem/kikuchipy/commits?author=friedkitteh" title="Documentation">📖</a> <a href="#question-friedkitteh" title="Answering Questions">💬</a> <a href="https://github.com/pyxem/kikuchipy/pulls?q=is%3Apr+reviewed-by%3Afriedkitteh" title="Reviewed Pull Requests">👀</a> <a href="https://github.com/pyxem/kikuchipy/commits?author=friedkitteh" title="Tests">⚠️</a></td>
     <td align="center"><a href="https://github.com/onatlandsmyr"><img src="https://avatars.githubusercontent.com/u/34620114?v=4?s=100" width="100px;" alt=""/><br /><sub><b>Ole Natlandsmyr</b></sub></a><br /><a href="https://github.com/pyxem/kikuchipy/commits?author=onatlandsmyr" title="Code">💻</a> <a href="https://github.com/pyxem/kikuchipy/commits?author=onatlandsmyr" title="Documentation">📖</a> <a href="#question-onatlandsmyr" title="Answering Questions">💬</a> <a href="https://github.com/pyxem/kikuchipy/pulls?q=is%3Apr+reviewed-by%3Aonatlandsmyr" title="Reviewed Pull Requests">👀</a> <a href="https://github.com/pyxem/kikuchipy/commits?author=onatlandsmyr" title="Tests">⚠️</a></td>

doc/changelog.rst

@@ -17,6 +17,7 @@ Unreleased
 
 Contributors
 ------------
+- Eric Prestat
 - Håkon Wiik Ånes
 - Lars Andreas Hastad Lervik
 
@@ -32,6 +33,9 @@ Added
 
 Changed
 -------
+- Dependency versions for dask >= 2021.8.1, fixing some memory issues encountered after
+  2021.3.1, and HyperSpy >= 1.6.4. Remove importlib_metadata from package dependencies.
+  (`#418 <https://github.com/pyxem/kikuchipy/pull/418>`_)
 - Performance improvements to EBSD dictionary generation, giving a substantial speed-up.
   (`#405 <https://github.com/pyxem/kikuchipy/pull/405>`_)
 - Rename projection methods from `project()`/`iproject()` to

kikuchipy/release.py

@@ -27,6 +27,7 @@
     "Lars Andreas Hastad Lervik",
     "Ole Natlandsmyr",
     "Tina Bergh",
+    "Eric Prestat",
 ]
 license = "GPLv3+"
 maintainer = "Håkon Wiik Ånes"

setup.py

@@ -119,15 +119,10 @@
     extras_require=extra_feature_requirements,
     # fmt: off
     install_requires=[
-        # TODO: Restrict newest dask version until
-        #   https://github.com/dask/dask/issues/7583 is resolved
-        "dask[array]        >= 2.18, <= 2021.03.1",
+        "dask[array]        >= 2021.8.1",
         "diffsims           >= 0.4",
-        "hyperspy           >= 1.5.2",
+        "hyperspy           >= 1.6.4",
         "h5py               >= 2.10",
-        # TODO: Remove after new HyperSpy release after v1.6.3.
-        #   See https://github.com/hyperspy/hyperspy/issues/2792.
-        "importlib_metadata >= 3.6",
         "matplotlib         >= 3.3",
         "numpy              >= 1.19",
         "numba              >= 0.48",