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Add q2-deblur stats visualization #215

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wasade opened this issue Oct 13, 2017 · 2 comments
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Add q2-deblur stats visualization #215

wasade opened this issue Oct 13, 2017 · 2 comments
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@wasade
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wasade commented Oct 13, 2017

The MVP tutorial currently executes q2-deblur. In responding to a forum post about stats from q2-deblur, I was hoping to link to one of the existing .qzv files showing examples, and realized that they're not being generated. Would it be possible to include the sample stats output in the tutorial? Do to so, what should be necessary is to add --p-sample-stats to the qiime deblur denoise-16S call, second, to add a cell executing qiime deblur visualize-stats on the resulting .qzv. I'd be happy to suggest tutorial documentation surrounding the statistics if that would be of use.

@jairideout
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👍, are you available to work on this?

@wasade
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wasade commented Oct 16, 2017

I do not think I can commit to it for 2017.10, but I'll see if I can find someone who can.

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